Strain identifier
BacDive ID: 15470
Type strain: 
Species: Streptomyces griseorubiginosus
Strain Designation: 503
Strain history: KCC S-0102 <-- R. Shinobu 503.
NCBI tax ID(s): 67304 (species)
General
@ref: 9436
BacDive-ID: 15470
DSM-Number: 40285
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces griseorubiginosus 503 is a mesophilic bacterium of the family Streptomycetaceae.
NCBI tax id
- NCBI tax id: 67304
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9436 | <- E.B. Shirling, ISP <- KCC <- R. Shinobu, OEU, 503 |
| 67770 | KCC S-0102 <-- R. Shinobu 503. |
doi: 10.13145/bacdive15470.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces griseorubiginosus
- full scientific name: Streptomyces griseorubiginosus (Ryabova and Preobrazhenskaya 1957) Pridham et al. 1958 (Approved Lists 1980)
synonyms
@ref synonym 20215 Streptomyces phaeoviridis 20215 Streptomyces phaeopurpureus 20215 Actinomyces griseorubiginosus
@ref: 9436
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces griseorubiginosus
full scientific name: Streptomyces griseorubiginosus (Ryabova and Preobrazhenskaya 1957) Pridham et al. 1958 emend. Nouioui et al. 2018
strain designation: 503
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9436 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9436 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9436 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_24499.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_1457;97_14887;98_18419;99_24499&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: DQ026665
- Sequence Identity:
- Total samples: 349
- soil counts: 131
- aquatic counts: 16
- animal counts: 5
- plant counts: 197
Safety information
risk assessment
- @ref: 9436
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces phaeoviridis gene for 16S rRNA, partial sequence | AB122730 | 564 | ena | 67340 |
| 20218 | Streptomyces phaeopurpureus gene for 16S rRNA, partial sequence, strain: NBRC 12900 | AB184230 | 1471 | ena | 67340 |
| 20218 | Streptomyces phaeopurpureus strain NRRL B-2258 16S ribosomal RNA gene, partial sequence | DQ026665 | 1494 | ena | 67340 |
External links
@ref: 9436
culture collection no.: DSM 40285, ATCC 23947, CBS 931.68, IFO 12900, ISP 5285, KCC S-0102, NBRC 12900, NRRL B-2258, RIA 1199, OEU 503, JCM 4102, BCRC 15132, CGMCC 4.1740, JCM 4661, NCIMB 9832
straininfo link
- @ref: 84557
- straininfo: 319086
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9436 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40285) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40285 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84557 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID319086.1 | StrainInfo: A central database for resolving microbial strain identifiers |