Strain identifier
version 8.1 (current version)
General
@ref: 60364
BacDive-ID: 154698
keywords: Bacteria, aerobe, mesophilic
description: Pseudomonas aeruginosa CCUG 54874 B is an aerobe, mesophilic bacterium that was isolated from Human trachea,35-yr-old man.
NCBI tax id
- NCBI tax id: 287
- Matching level: species
doi: 10.13145/bacdive154698.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas aeruginosa
- full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum
@ref: 60364
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
type strain: no
Culture and growth conditions
culture temp
- @ref: 60364
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 60364
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | + | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | + | assimilation |
68369 | 16899 | D-mannitol | + | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | + | hydrolysis |
68369 | 4853 | esculin | + | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | + | hydrolysis |
68369 | 17634 | D-glucose | - | fermentation |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | + | |
68369 | beta-glucosidase | + | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | + | 3.5.3.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 60364 C12:0 5 12 60364 C14:0 0.8 14 60364 C15:0 0.8 15 60364 C16:0 21.9 16 60364 C10:0 3OH 4.7 11.423 60364 C11:0 ISO 3OH 0.4 12.09 60364 C12:0 2OH 5.3 13.178 60364 C12:0 3OH 5.3 13.455 60364 C13:0 ISO 2OH 0.4 13.814 60364 C15:0 ISO 0.3 14.621 60364 C16:1 ω7c 18.3 15.819 60364 C17:0 CYCLO 1.1 16.888 60364 C17:0 iso 1.3 16.629 60364 C17:1 ω8c 0.4 16.792 60364 C18:1 ω7c /12t/9t 32.7 17.824 60364 C18:1 ω9c 0.5 17.769 60364 C18:2 ω6,9c/C18:0 ANTE 0.4 17.724 60364 C19:0 CYCLO ω8c 0.6 18.9 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
60364 | + | - | - | + | - | + | + | + | + | - | - | + | + | - | + | + | + | + | + | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 60364
- sample type: Human trachea,35-yr-old man
- sampling date: 2007
- geographic location: Kalmar
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | #Male |
#Host Body-Site | #Oral cavity and airways | #Trachea |
#Infection | #Patient |
External links
@ref: 60364
culture collection no.: CCUG 54874 B
straininfo link
- @ref: 108276
- straininfo: 411995
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
60364 | Curators of the CCUG | https://www.ccug.se/strain?id=54874 | Culture Collection University of Gothenburg (CCUG) (CCUG 54874 B) | |
68369 | Automatically annotated from API 20NE | |||
108276 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID411995.1 |