Strain identifier

BacDive ID: 154615

Type strain: No

Species: Staphylococcus aureus

NCBI tax ID(s): 1280 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 60249

BacDive-ID: 154615

keywords: genome sequence, Bacteria, aerobe, mesophilic, Gram-positive

description: Staphylococcus aureus CCUG 54581 is an aerobe, mesophilic, Gram-positive bacterium of the family Staphylococcaceae.

NCBI tax id

  • NCBI tax id: 1280
  • Matching level: species

doi: 10.13145/bacdive154615.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus aureus
  • full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Staphylococcus aureus subsp. anaerobius

@ref: 60249

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus aureus

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 100

Culture and growth conditions

culture temp

  • @ref: 60249
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60249
  • oxygen tolerance: aerobe

spore formation

@refspore formationconfidence
69480no99.412
69481no99

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea-hydrolysis
6837529016arginine+hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose+fermentation
6837516899D-mannitol+fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose+fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: yes

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease-3.5.1.5

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
60249-+--+++++++---++--+--+++--

Isolation, sampling and environmental information

isolation

  • @ref: 60249
  • sampling date: 1976

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Staphylococcus aureus NCTC10833GCA_900457575contigncbi1280
66792Staphylococcus aureus strain NCTC108331280.18050wgspatric1280

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno99no
motileno90.13no
gram-positiveyes89.248no
anaerobicno99.518yes
aerobicyes90.413no
halophileyes93.672no
spore-formingno92.634no
thermophileno99.729yes
glucose-utilyes88.271no
flagellatedno91.245no
glucose-fermentyes85.67no

External links

@ref: 60249

culture collection no.: CCUG 54581, CCM 2773, ATCC 25904, NCTC 10833

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Genetics12753184Identification of a 5-nucleotide sequence that controls expression of the ica locus in Staphylococcus aureus and characterization of the DNA-binding properties of IcaR.Jefferson KK, Cramton SE, Gotz F, Pier GBMol Microbiol10.1046/j.1365-2958.2003.03482.x2003*Bacterial Adhesion, Base Sequence, Binding Sites, *Biofilms, Cell Adhesion, DNA, Bacterial/analysis, DNA-Binding Proteins/metabolism, *Gene Expression Regulation, Bacterial, Molecular Sequence Data, Polysaccharides, Bacterial/*biosynthesis, Regulatory Sequences, Nucleic Acid/*genetics, Staphylococcus aureus/*genetics/physiology, Transcription, Genetic/geneticsMetabolism
Biotechnology16177366Poly-N-acetylglucosamine production in Staphylococcus aureus is essential for virulence in murine models of systemic infection.Kropec A, Maira-Litran T, Jefferson KK, Grout M, Cramton SE, Gotz F, Goldmann DA, Pier GBInfect Immun10.1128/IAI.73.10.6868-6876.20052005Adhesins, Bacterial/genetics, Animals, Bacteremia/immunology/*microbiology, Bacterial Proteins/*genetics, Disease Models, Animal, Gene Deletion, Immunity, Innate/immunology, Mice, Phagocytosis, Staphylococcal Infections/immunology/*microbiology, Staphylococcus aureus/genetics/metabolism/*pathogenicity, Virulence/genetics, beta-Glucans/chemistry/*immunologyMetabolism
Pathogenicity31911193Remarkable capacity of brosimine b to disrupt methicillin-resistant Staphylococcus aureus (MRSA) preformed biofilms.Reis SVD, Couto NMG, Brust FR, Trentin DS, Silva JKRD, Arruda MSP, Gnoatto SCB, Macedo AJMicrob Pathog10.1016/j.micpath.2020.1039672020Animals, Anti-Bacterial Agents/chemistry/*pharmacology, Biofilms/*drug effects, Flavonoids/chemistry/*pharmacology, Humans, Methicillin-Resistant Staphylococcus aureus/*drug effects/physiology, Microbial Sensitivity Tests, Moths/drug effects/growth & development, Staphylococcal Infections/microbiology, Staphylococcus aureus/drug effects/growth & development
Pathogenicity35513687Application of pulse-modulated radio-frequency atmospheric pressure glow discharge for degradation of doxycycline from a flowing liquid solution.Dzimitrowicz A, Caban M, Terefinko D, Pohl P, Jamroz P, Babinska W, Cyganowski P, Stepnowski P, Lojkowska E, Sledz W, Motyka-Pomagruk ASci Rep10.1038/s41598-022-11088-w2022Anti-Bacterial Agents/pharmacology, Atmospheric Pressure, *Body Fluids, *Doxycycline/pharmacology, Escherichia coli, Humans, NitrogenMetabolism
Phylogeny36080125Bioassay-Guided Isolation of New Flavonoid Glycosides from Platanus x acerifolia Leaves and Their Staphylococcus aureus Inhibitory Effects.Wu X, Tang Y, Osman EEA, Wan J, Jiang W, Yang G, Xiong J, Zhu Q, Hu JFMolecules10.3390/molecules271753572022Anti-Bacterial Agents/chemistry, Biological Assay, Flavonoids/chemistry, *Glycosides/chemistry, *Methicillin-Resistant Staphylococcus aureus, Microbial Sensitivity Tests, Plant Leaves/chemistry, Quercetin/pharmacology, Staphylococcus aureus

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
60249Curators of the CCUGhttps://www.ccug.se/strain?id=54581Culture Collection University of Gothenburg (CCUG) (CCUG 54581)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68375Automatically annotated from API ID32STA
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1