Strain identifier
BacDive ID: 15460
Type strain: 
Species: Streptomyces peucetius
Strain Designation: FH 1308
Strain history: ATCC 29050 <-- IMRU 3868 <-- A. Di Marco.
NCBI tax ID(s): 1950 (species)
version 8.1 (current version)
General
@ref: 9772
BacDive-ID: 15460
DSM-Number: 40754
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, antibiotic compound production
description: Streptomyces peucetius FH 1308 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.
NCBI tax id
- NCBI tax id: 1950
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9772 | <- Hoechst AG, FH 1308 <- IMI |
| 67770 | ATCC 29050 <-- IMRU 3868 <-- A. Di Marco. |
doi: 10.13145/bacdive15460.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces peucetius
- full scientific name: Streptomyces peucetius Grein et al. 1963 (Approved Lists 1980)
@ref: 9772
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces peucetius
full scientific name: Streptomyces peucetius Grein et al. 1963
strain designation: FH 1308
type strain: yes
Morphology
multimedia
- @ref: 9772
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40754.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9772 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9772 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9772 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
- @ref: 9772
- compound: daunomycin
metabolite production
- @ref: 67770
- Chebi-ID: 41977
- metabolite: daunorubicin
- production: yes
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 9772 | soil | Italy | ITA | Europe |
| 67770 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 9772
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces peucetius gene for 16S rRNA, partial sequence | AB122778 | 564 | ena | 1950 |
| 20218 | Streptomyces peucetius gene for 16S rRNA | AB045887 | 1486 | ena | 1950 |
| 20218 | Streptomyces peucetius gene for 16S rRNA, partial sequence, strain: NBRC 100596 | AB249907 | 1453 | ena | 1950 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptomyces peucetius ATCC 29050 | 2582581450 | draft | img | 1950 |
| 66792 | Streptomyces peucetius ATCC29050 | 2582581469 | draft | img | 1950 |
| 66792 | Streptomyces peucetius ATCC 29050 | 2582581451 | draft | img | 1950 |
| 66792 | Streptomyces peucetius ATCC 29050 | 2582581452 | draft | img | 1950 |
| 67770 | Streptomyces peucetius NRRL WC-3868 | GCA_000725565 | scaffold | ncbi | 1950 |
External links
@ref: 9772
culture collection no.: DSM 40754, ATCC 29050, CBS 376.71, CMI 101335, DSM 41191, IMI 101335, IMRU 3868, NCIB 10972, JCM 9920, CCT 4840, CECT 3332, CGMCC 4.1799, KCTC 9199, MTCC 3000, NBRC 100596, NCIMB 10972, NRRL B-3826, NRRL WC-3868
straininfo link
- @ref: 84548
- straininfo: 44809
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 1537806 | Expression of doxorubicin-daunorubicin resistance genes in different anthracycline-producing mutants of Streptomyces peucetius. | Colombo AL, Solinas MM, Perini G, Biamonti G, Zanella G, Caruso M, Torti F, Filippini S, Inventi-Solari A, Garofano L | J Bacteriol | 10.1128/jb.174.5.1641-1646.1992 | 1992 | Cloning, Molecular, Daunorubicin/*metabolism, Doxorubicin/metabolism, Drug Resistance, Microbial/*genetics, *Gene Expression Regulation, Bacterial, Genes, Regulator/genetics, Models, Biological, Mutation, Naphthacenes/metabolism, Nucleic Acid Hybridization, RNA Precursors, Restriction Mapping, Streptomyces/*genetics, Transcription, Genetic | Enzymology |
| Enzymology | 1588310 | Purification and characterization of TDP-D-glucose 4,6-dehydratase from anthracycline-producing streptomycetes. | Thompson MW, Strohl WR, Floss HG | J Gen Microbiol | 10.1099/00221287-138-4-779 | 1992 | Amino Acid Sequence, Antibiotics, Antineoplastic/*biosynthesis, Enzyme Activation, Fermentation, Hexosamines/biosynthesis, Hydro-Lyases/antagonists & inhibitors/chemistry/*isolation & purification, Hydrogen-Ion Concentration, Kinetics, Molecular Sequence Data, Streptomyces/*enzymology/metabolism, Thymidine Monophosphate/pharmacology, Thymine Nucleotides/pharmacology | Genetics |
| Metabolism | 1729206 | Regulation of secondary metabolism in Streptomyces spp. and overproduction of daunorubicin in Streptomyces peucetius. | Stutzman-Engwall KJ, Otten SL, Hutchinson CR | J Bacteriol | 10.1128/jb.174.1.144-154.1992 | 1992 | Amino Acid Sequence, Anthracyclines, Antibiotics, Antineoplastic/analysis/*biosynthesis, Base Sequence, Daunorubicin/analysis/*biosynthesis, Drug Resistance, Microbial, Gene Expression, Molecular Sequence Data, Mutagenesis, Insertional, Protein Conformation, Restriction Mapping, Sequence Homology, Nucleic Acid, Streptomyces/genetics/*metabolism, Transformation, Genetic | Genetics |
| Enzymology | 2345153 | Cloning and expression of daunorubicin biosynthesis genes from Streptomyces peucetius and S. peucetius subsp. caesius. | Otten SL, Stutzman-Engwall KJ, Hutchinson CR | J Bacteriol | 10.1128/jb.172.6.3427-3434.1990 | 1990 | Anthracyclines, Antibiotics, Antineoplastic/biosynthesis, *Cloning, Molecular, Daunorubicin/*biosynthesis, *Gene Expression, *Genes, Bacterial, Genetic Complementation Test, Mutation, Streptomyces/*genetics/metabolism | Metabolism |
| Enzymology | 3042115 | Physiological regulation of protease activity in Streptomyces peucetius. | Gibb GD, Strohl WR | Can J Microbiol | 10.1139/m88-034 | 1988 | Caseins/metabolism, Culture Media, Kinetics, Peptide Hydrolases/*metabolism, Streptomyces/enzymology/*growth & development | Metabolism |
| Metabolism | 7773378 | Streptomyces peucetius daunorubicin biosynthesis gene, dnrF: sequence and heterologous expression. | Filippini S, Solinas MM, Breme U, Schluter MB, Gabellini D, Biamonti G, Colombo AL, Garofano L | Microbiology (Reading) | 10.1099/13500872-141-4-1007 | 1995 | Amino Acid Sequence, Aryl Hydrocarbon Hydroxylases/genetics/metabolism, Bacterial Proteins/genetics/metabolism, Base Sequence, Chromosome Mapping, Cloning, Molecular, DNA Primers/genetics, DNA, Bacterial/genetics, Daunorubicin/*biosynthesis, Escherichia coli/genetics, Gene Expression Regulation, Bacterial, *Genes, Bacterial, Molecular Sequence Data, Open Reading Frames, Sequence Homology, Amino Acid, Streptomyces/*genetics/metabolism, Substrate Specificity | Enzymology |
| Genetics | 7828855 | Characterization of the Streptomyces peucetius ATCC 29050 genes encoding doxorubicin polyketide synthase. | Grimm A, Madduri K, Ali A, Hutchinson CR | Gene | 10.1016/0378-1119(94)90625-4 | 1994 | Amino Acid Sequence, Base Sequence, Consensus Sequence, *Genes, Bacterial, Molecular Sequence Data, Multienzyme Complexes/biosynthesis/*genetics, Open Reading Frames, Restriction Mapping, Sequence Homology, Amino Acid, Sequence Homology, Nucleic Acid, Streptomyces/*enzymology/*genetics | Enzymology |
| Genetics | 7868594 | Regulation of daunorubicin production in Streptomyces peucetius by the dnrR2 locus. | Otten SL, Ferguson J, Hutchinson CR | J Bacteriol | 10.1128/jb.177.5.1216-1224.1995 | 1995 | Amino Acid Sequence, Anthracyclines, Antibiotics, Antineoplastic/biosynthesis, Bacterial Proteins/genetics, Base Sequence, *DNA-Binding Proteins, Daunorubicin/*biosynthesis, *Gene Expression Regulation, Bacterial, Genes, Bacterial/*genetics, Genes, Regulator/genetics, Models, Genetic, Molecular Sequence Data, Mutagenesis, Insertional, Repressor Proteins/genetics, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Streptomyces/*genetics, *Transcription Factors | Transcriptome |
| Genetics | 8655504 | The Streptomyces peucetius drrC gene encodes a UvrA-like protein involved in daunorubicin resistance and production. | Lomovskaya N, Hong SK, Kim SU, Fonstein L, Furuya K, Hutchinson RC | J Bacteriol | 10.1128/jb.178.11.3238-3245.1996 | 1996 | Adenosine Triphosphatases/*genetics, Amino Acid Sequence, Antibiotics, Antineoplastic/*pharmacology, Bacterial Proteins/*genetics, Base Sequence, DNA, Bacterial/chemistry, DNA-Binding Proteins/*genetics, Daunorubicin/biosynthesis/*pharmacology, Drug Resistance/genetics, Escherichia coli/genetics, *Escherichia coli Proteins, *Genes, Bacterial, Lysogeny, Molecular Sequence Data, Streptomyces/drug effects/*genetics/metabolism | Biotechnology |
| Genetics | 8932700 | The dnrM gene in Streptomyces peucetius contains a naturally occurring frameshift mutation that is suppressed by another locus outside of the daunorubicin-production gene cluster. | Gallo MA, Ward J, Hutchinson CR | Microbiology (Reading) | 10.1099/13500872-142-2-269 | 1996 | Amino Acid Sequence, Base Sequence, DNA Primers/genetics, DNA, Bacterial/genetics, Daunorubicin/*biosynthesis, Escherichia coli/genetics, *Frameshift Mutation, *Genes, Bacterial, Genes, Suppressor, Hydro-Lyases/genetics, Molecular Sequence Data, *Multigene Family, Nucleotidyltransferases/genetics, Polymerase Chain Reaction, Streptomyces/*genetics/metabolism | Biotechnology |
| Metabolism | 9864344 | Doxorubicin overproduction in Streptomyces peucetius: cloning and characterization of the dnrU ketoreductase and dnrV genes and the doxA cytochrome P-450 hydroxylase gene. | Lomovskaya N, Otten SL, Doi-Katayama Y, Fonstein L, Liu XC, Takatsu T, Inventi-Solari A, Filippini S, Torti F, Colombo AL, Hutchinson CR | J Bacteriol | 10.1128/JB.181.1.305-318.1999 | 1999 | Acyl Carrier Protein/genetics/metabolism, Alcohol Oxidoreductases/*genetics/*metabolism, Amino Acid Sequence, Anthracyclines/metabolism, Bacterial Proteins/*genetics/*metabolism, Base Sequence, Chromosome Mapping, Cloning, Molecular, Cytochrome P-450 Enzyme System/*genetics/*metabolism, DNA Primers/genetics, DNA, Bacterial/genetics, Doxorubicin/*biosynthesis, Gene Expression, *Genes, Bacterial, Genetic Complementation Test, Mixed Function Oxygenases/*genetics/*metabolism, Molecular Sequence Data, Multigene Family, Mutagenesis, Insertional, Mutation, Streptomyces/enzymology/*genetics/*metabolism, Substrate Specificity | Enzymology |
| Phylogeny | 25687349 | Streptomyces albiflavescens sp. nov., an actinomycete isolated from soil. | Han X, Zheng J, Xin D, Xin Y, Wei X, Zhang J | Int J Syst Evol Microbiol | 10.1099/ijs.0.000121 | 2015 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rainforest, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
| Phylogeny | 26608172 | Streptomyces formicae sp. nov., a novel actinomycete isolated from the head of Camponotus japonicus Mayr. | Bai L, Liu C, Guo L, Piao C, Li Z, Li J, Jia F, Wang X, Xiang W | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0628-7 | 2015 | Animals, Ants/*microbiology, China, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry/metabolism, Head/microbiology, Molecular Sequence Data, Phylogeny, Streptomyces/classification/genetics/*isolation & purification | Genetics |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9772 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40754) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40754 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 84548 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID44809.1 | StrainInfo: A central database for resolving microbial strain identifiers |