Strain identifier

BacDive ID: 154532

Type strain: No

Species: Achromobacter aegrifaciens

NCBI tax ID(s): 1287736 (species)

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General

@ref: 60117

BacDive-ID: 154532

keywords: Bacteria, aerobe, mesophilic

description: Achromobacter aegrifaciens CCUG 54268 is an aerobe, mesophilic bacterium that was isolated from Human trachea,39-yr-old man.

NCBI tax id

  • NCBI tax id: 1287736
  • Matching level: species

doi: 10.13145/bacdive154532.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter aegrifaciens
  • full scientific name: Achromobacter aegrifaciens Vandamme et al. 2014

@ref: 60117

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter aegrifaciens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 60117
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60117
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    60117C12:01.112
    60117C14:05.214
    60117C15:00.315
    60117C16:032.616
    60117C17:00.617
    60117C18:01.318
    60117C12:0 2OH2.313.178
    60117C12:0 ALDE ?0.510.915
    60117C14:0 3OH/C16:1 ISO I6.215.485
    60117C15:1 ω6c0.414.856
    60117C16:0 2OH0.417.233
    60117C16:1 ω7c25.215.819
    60117C17:0 CYCLO16.816.888
    60117C18:1 ω7c /12t/9t6.417.824
    60117C18:1 ω9c0.417.769
    60117C18:2 ω6,9c/C18:0 ANTE0.217.724
    60117C19:0 CYCLO ω8c0.318.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
60117-++--+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
60117+-------------+--++++

Isolation, sampling and environmental information

isolation

  • @ref: 60117
  • sample type: Human trachea,39-yr-old man
  • sampling date: 2007-01-13
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Oral cavity and airways#Trachea
#Infection#Patient

External links

@ref: 60117

culture collection no.: CCUG 54268

straininfo link

  • @ref: 108149
  • straininfo: 303648

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
60117Curators of the CCUGhttps://www.ccug.se/strain?id=54268Culture Collection University of Gothenburg (CCUG) (CCUG 54268)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
108149Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID303648.1