Strain identifier

BacDive ID: 154520

Type strain: No

Species: Clostridioides difficile

NCBI tax ID(s): 1496 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 60102

BacDive-ID: 154520

keywords: Bacteria, anaerobe, mesophilic

description: Clostridioides difficile CCUG 54206 is an anaerobe, mesophilic bacterium that was isolated from Human feces,74-yr-old man.

NCBI tax id

  • NCBI tax id: 1496
  • Matching level: species

doi: 10.13145/bacdive154520.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Peptostreptococcaceae
  • genus: Clostridioides
  • species: Clostridioides difficile
  • full scientific name: Clostridioides difficile (Hall and O'Toole 1935) Lawson et al. 2016
  • synonyms

    @refsynonym
    20215Bacillus difficilis
    20215Peptoclostridium difficile
    20215Clostridium difficile

@ref: 60102

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Eubacteriales

family: Peptostreptococcaceae

genus: Clostridioides

species: Clostridioides difficile

type strain: no

Culture and growth conditions

culture temp

  • @ref: 60102
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60102
  • oxygen tolerance: anaerobe

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    60102C10:01.410
    60102C12:03.412
    60102C14:0314
    60102C16:015.916
    60102C18:08.518
    60102C16:0 aldehyde4.514.949
    60102C16:0 iso1.815.626
    60102C16:1 ω7c8.315.819
    60102C16:1 ω9c515.774
    60102C17:0 CYCLO3.716.888
    60102C17:1 ISO I/C16:0 DMA16.616.481
    60102C18:1 ω7c /12t/9t2.917.824
    60102C18:1 ω9c7.317.769
    60102C18:2 ω6,9c/C18:0 ANTE2.317.724
    60102C19:0 CYCLO ω9c6.318.87
    60102C19:1 ISO I6.418.473
    60102unknown 9.7302.89.73
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

Isolation, sampling and environmental information

isolation

  • @ref: 60102
  • sample type: Human feces,74-yr-old man
  • sampling date: 2006-12-08
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Gastrointestinal tract#Feces (Stool)
#Infection#Patient

External links

@ref: 60102

culture collection no.: CCUG 54206

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
60102Curators of the CCUGhttps://www.ccug.se/strain?id=54206Culture Collection University of Gothenburg (CCUG) (CCUG 54206)