Strain identifier

BacDive ID: 154373

Type strain: No

Species: Paenibacillus sp.

NCBI tax ID(s): 58172 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 59857

BacDive-ID: 154373

keywords: Bacteria, aerobe, mesophilic

description: Paenibacillus sp. CCUG 53285 is an aerobe, mesophilic bacterium that was isolated from Human blood,23-yr-old man.

NCBI tax id

  • NCBI tax id: 58172
  • Matching level: species

doi: 10.13145/bacdive154373.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus sp.
  • full scientific name: Paenibacillus Ash et al. 1994
  • synonyms

    • @ref: 20215
    • synonym: Aerobacillus

@ref: 59857

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59857
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59857
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose-fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea+hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis
6837117754glycerol+builds acid from
6837117113erythritol-builds acid from
6837117108D-arabinose+builds acid from
6837130849L-arabinose-builds acid from
6837116988D-ribose+builds acid from
6837165327D-xylose+builds acid from
6837165328L-xylose-builds acid from
6837115963ribitol-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837112936D-galactose+builds acid from
6837117634D-glucose+builds acid from
6837115824D-fructose+builds acid from
6837116024D-mannose+builds acid from
6837117266L-sorbose-builds acid from
6837162345L-rhamnose+builds acid from
6837116813galactitol-builds acid from
6837117268myo-inositol-builds acid from
6837116899D-mannitol+builds acid from
6837117924D-sorbitol-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837159640N-acetylglucosamine+builds acid from
6837127613amygdalin+builds acid from
6837118305arbutin+builds acid from
683714853esculin+builds acid from
6837117814salicin+builds acid from
6837117057cellobiose+builds acid from
6837117306maltose+builds acid from
6837117716lactose+builds acid from
6837128053melibiose+builds acid from
6837117992sucrose+builds acid from
6837127082trehalose+builds acid from
6837115443inulin+builds acid from
683716731melezitose-builds acid from
6837116634raffinose+builds acid from
6837128017starch+builds acid from
6837128087glycogen+builds acid from
6837117151xylitol-builds acid from
6837128066gentiobiose+builds acid from
6837132528turanose+builds acid from
6837162318D-lyxose-builds acid from
6837116443D-tagatose-builds acid from
6837128847D-fucose-builds acid from
6837118287L-fucose-builds acid from
6837118333D-arabitol-builds acid from
6837118403L-arabitol-builds acid from
6837124265gluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371Potassium 5-ketogluconate-builds acid from

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease+3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59857C14:00.714
    59857C15:00.515
    59857C16:05.916
    59857C18:00.318
    59857C14:0 ISO213.618
    59857C15:0 ANTEISO33.614.711
    59857C15:0 ISO18.414.621
    59857C16:0 iso17.315.626
    59857C17:0 anteiso10.716.722
    59857C17:0 iso9.516.629
    59857C18:2 ω6,9c/C18:0 ANTE0.717.724
    59857Unidentified0.517.756
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
59857+----++--------------

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
59857-+-+-++---++++-+--+---++++++++++++-+++-++---------

Isolation, sampling and environmental information

isolation

  • @ref: 59857
  • sample type: Human blood,23-yr-old man
  • sampling date: 2006-08-01
  • geographic location: Falun
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 59857

culture collection no.: CCUG 53285

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59857Curators of the CCUGhttps://www.ccug.se/strain?id=53285Culture Collection University of Gothenburg (CCUG) (CCUG 53285)
68368Automatically annotated from API 20E
68371Automatically annotated from API 50CH acid