Strain identifier
version 8.1 (current version)
General
@ref: 59857
BacDive-ID: 154373
keywords: Bacteria, aerobe, mesophilic
description: Paenibacillus sp. CCUG 53285 is an aerobe, mesophilic bacterium that was isolated from Human blood,23-yr-old man.
NCBI tax id
- NCBI tax id: 58172
- Matching level: species
doi: 10.13145/bacdive154373.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus sp.
- full scientific name: Paenibacillus Ash et al. 1994
synonyms
- @ref: 20215
- synonym: Aerobacillus
@ref: 59857
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 59857
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 59857
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 17992 | sucrose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | - | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | + | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
68371 | 17754 | glycerol | + | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17108 | D-arabinose | + | builds acid from |
68371 | 30849 | L-arabinose | - | builds acid from |
68371 | 16988 | D-ribose | + | builds acid from |
68371 | 65327 | D-xylose | + | builds acid from |
68371 | 65328 | L-xylose | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
68371 | 12936 | D-galactose | + | builds acid from |
68371 | 17634 | D-glucose | + | builds acid from |
68371 | 15824 | D-fructose | + | builds acid from |
68371 | 16024 | D-mannose | + | builds acid from |
68371 | 17266 | L-sorbose | - | builds acid from |
68371 | 62345 | L-rhamnose | + | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16899 | D-mannitol | + | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68371 | 59640 | N-acetylglucosamine | + | builds acid from |
68371 | 27613 | amygdalin | + | builds acid from |
68371 | 18305 | arbutin | + | builds acid from |
68371 | 4853 | esculin | + | builds acid from |
68371 | 17814 | salicin | + | builds acid from |
68371 | 17057 | cellobiose | + | builds acid from |
68371 | 17306 | maltose | + | builds acid from |
68371 | 17716 | lactose | + | builds acid from |
68371 | 28053 | melibiose | + | builds acid from |
68371 | 17992 | sucrose | + | builds acid from |
68371 | 27082 | trehalose | + | builds acid from |
68371 | 15443 | inulin | + | builds acid from |
68371 | 6731 | melezitose | - | builds acid from |
68371 | 16634 | raffinose | + | builds acid from |
68371 | 28017 | starch | + | builds acid from |
68371 | 28087 | glycogen | + | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28066 | gentiobiose | + | builds acid from |
68371 | 32528 | turanose | + | builds acid from |
68371 | 62318 | D-lyxose | - | builds acid from |
68371 | 16443 | D-tagatose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 24265 | gluconate | - | builds acid from |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | Potassium 5-ketogluconate | - | builds acid from |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | yes |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
---|---|---|---|---|
68368 | 15688 | acetoin | - | |
68368 | 35581 | indole | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68368 | cytochrome oxidase | - | 1.9.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | + | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 59857 C14:0 0.7 14 59857 C15:0 0.5 15 59857 C16:0 5.9 16 59857 C18:0 0.3 18 59857 C14:0 ISO 2 13.618 59857 C15:0 ANTEISO 33.6 14.711 59857 C15:0 ISO 18.4 14.621 59857 C16:0 iso 17.3 15.626 59857 C17:0 anteiso 10.7 16.722 59857 C17:0 iso 9.5 16.629 59857 C18:2 ω6,9c/C18:0 ANTE 0.7 17.724 59857 Unidentified 0.5 17.756 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59857 | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
59857 | - | + | - | + | - | + | + | - | - | - | + | + | + | + | - | + | - | - | + | - | - | - | + | + | + | + | + | + | + | + | + | + | + | + | - | + | + | + | - | + | + | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 59857
- sample type: Human blood,23-yr-old man
- sampling date: 2006-08-01
- geographic location: Falun
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | #Male |
#Host Body Product | #Fluids | #Blood |
#Infection | #Patient |
External links
@ref: 59857
culture collection no.: CCUG 53285
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
59857 | Curators of the CCUG | https://www.ccug.se/strain?id=53285 | Culture Collection University of Gothenburg (CCUG) (CCUG 53285) | |
68368 | Automatically annotated from API 20E | |||
68371 | Automatically annotated from API 50CH acid |