Strain identifier

BacDive ID: 154353

Type strain: No

Species: Kocuria palustris

NCBI tax ID(s): 71999 (species)

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General

@ref: 59834

BacDive-ID: 154353

keywords: Bacteria, aerobe, mesophilic

description: Kocuria palustris CCUG 53222 is an aerobe, mesophilic bacterium that was isolated from Industry.

NCBI tax id

  • NCBI tax id: 71999
  • Matching level: species

doi: 10.13145/bacdive154353.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Kocuria
  • species: Kocuria palustris
  • full scientific name: Kocuria palustris Kovács et al. 1999

@ref: 59834

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Kocuria

species: Kocuria palustris

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59834
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59834
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose-fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation
6837516199urea+hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine-degradation
683754853esculin+hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose-fermentation
6837517306maltose-fermentation
6837517716lactose-fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose-fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose+builds acid from
6837816024D-mannose+builds acid from
6837817306maltose-builds acid from
6837817716lactose+builds acid from
6837827082trehalose-builds acid from
6837816899D-mannitol+builds acid from
6837817151xylitol-builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose-builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose-builds acid from
68378320061methyl alpha-D-glucopyranoside+builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine-hydrolysis
6837816199urea-hydrolysis

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837528368novobiocinyesyes1.8 µg
68378lysostaphinyesyes

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinyes
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin+
6837515688acetoin-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase-3.5.3.6
68378alkaline phosphatase+3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase+3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease+3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59834C14:01.514
    59834C16:01.716
    59834C18:0118
    59834C13:0 ANTEISO0.412.701
    59834C14:0 ISO2.813.618
    59834C15:0 ANTEISO66.214.711
    59834C15:0 ISO1.414.621
    59834C16:0 aldehyde0.314.949
    59834C16:0 iso1.615.626
    59834C16:0 ISO DMA ?1.316.107
    59834C17:0 anteiso5.316.722
    59834C17:0 ANTEISO DMA3.817.195
    59834C17:1 ω5c ISO2.116.461
    59834C18:1 ω9c1.217.769
    59834C18:2 ω6,9c/C18:0 ANTE1.117.724
    59834Unidentified0.717.477
    59834Unidentified1.118.7
    59834Unidentified0.819.065
    59834Unidentified2.619.433
    59834Unidentified0.919.684
    59834Unidentified1.719.783
    59834unknown 15.6650.615.665
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
59834+--+--+-+---+---+-+-+

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
59834+--+++--------+-----------

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
59834-++-+-+---++---+----

Isolation, sampling and environmental information

isolation

  • @ref: 59834
  • sample type: Industry
  • sampling date: 2006-07-13
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Industrial

External links

@ref: 59834

culture collection no.: CCUG 53222

straininfo link

  • @ref: 108016
  • straininfo: 303268

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59834Curators of the CCUGhttps://www.ccug.se/strain?id=53222Culture Collection University of Gothenburg (CCUG) (CCUG 53222)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
108016Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID303268.1