Strain identifier

BacDive ID: 154182

Type strain: No

Species: Selenomonas noxia

NCBI tax ID(s): 135083 (species)

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General

@ref: 59631

BacDive-ID: 154182

keywords: Bacteria, anaerobe, mesophilic

description: Selenomonas noxia CCUG 52675 is an anaerobe, mesophilic bacterium of the family Selenomonadaceae.

NCBI tax id

  • NCBI tax id: 135083
  • Matching level: species

doi: 10.13145/bacdive154182.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Negativicutes
  • order: Selenomonadales
  • family: Selenomonadaceae
  • genus: Selenomonas
  • species: Selenomonas noxia
  • full scientific name: Selenomonas noxia Moore et al. 1987

@ref: 59631

domain: Bacteria

phylum: Firmicutes

class: Negativicutes

order: Selenomonadales

family: Selenomonadaceae

genus: Selenomonas

species: Selenomonas noxia

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59631
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59631
  • oxygen tolerance: anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6838016199urea-hydrolysis
6838029016arginine-hydrolysis
6838016024D-mannose-fermentation
6838016634raffinose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68380serine arylamidase-
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase-
68380glycin arylamidase-
68380alanine arylamidase-3.4.11.2
68380tyrosine arylamidase-
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase-3.4.11.1
68380phenylalanine arylamidase-
68380leucyl glycin arylamidase-3.4.11.1
68380proline-arylamidase-3.4.11.5
68380L-arginine arylamidase-
68380alkaline phosphatase-3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase-3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase-3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase-3.5.3.6
68380urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59631C11:05.811
    59631C12:01.312
    59631C13:014.313
    59631C14:01.714
    59631C15:011.215
    59631C16:01.616
    59631C17:01.817
    59631C18:01.418
    59631C13:0 2OH0.414.191
    59631C13:0 3OH/C15:1 i I/H15.914.469
    59631C14:0 3OH/C16:1 ISO I315.485
    59631C15:1 ω8c6.214.792
    59631C16:0 iso 3OH4.617.145
    59631C16:1 ω11c3.615.757
    59631C16:1 ω9c DMA0.816.242
    59631C17:1 ISO I/C16:0 DMA0.516.481
    59631C17:1 ω8c2.516.792
    59631C18:1 DMA 17.2528.617.252
    59631C18:1 ISO H3.517.46
    59631C18:1 ω9c1.417.769
    59631C18:1 ω9c DMA1.318.226
    59631C18:2 ω6,9c/C18:0 ANTE2.117.724
    59631C19:1 ω11c/19:1 ω9c118.762
    59631Unidentified0.59.923
    59631Unidentified0.312.785
    59631Unidentified1.213.496
    59631Unidentified0.413.941
    59631Unidentified0.615.962
    59631Unidentified0.619.201
    59631unknown 16.7541.816.754
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59631--++------++--------

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
59631-----------------------------

External links

@ref: 59631

culture collection no.: CCUG 52675

straininfo link

  • @ref: 107865
  • straininfo: 303569

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59631Curators of the CCUGhttps://www.ccug.se/strain?id=52675Culture Collection University of Gothenburg (CCUG) (CCUG 52675)
68380Automatically annotated from API rID32A
68382Automatically annotated from API zym
107865Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID303569.1