Strain identifier

BacDive ID: 154045

Type strain: No

Species: Cupriavidus sp.

NCBI tax ID(s): 1873897 (species)

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General

@ref: 59430

BacDive-ID: 154045

keywords: Bacteria, aerobe, mesophilic

description: Cupriavidus sp. CCUG 52123 is an aerobe, mesophilic bacterium that was isolated from Human sputum,32-yr-old woman,cystic fibrosis.

NCBI tax id

  • NCBI tax id: 1873897
  • Matching level: species

doi: 10.13145/bacdive154045.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Cupriavidus
  • species: Cupriavidus sp.
  • full scientific name: Cupriavidus Makkar and Casida 1987

@ref: 59430

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Cupriavidus

species: Cupriavidus sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59430
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 59430
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836917306maltose-assimilation
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68369gelatinase-
68369urease-3.5.1.5
68369cytochrome oxidase+1.9.3.1
68369beta-glucosidase-3.2.1.21
68369arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59430C14:011.114
    59430C15:00.615
    59430C16:031.516
    59430C18:00.418
    59430C14:0 2OH2.415.205
    59430C14:0 3OH/C16:1 ISO I615.485
    59430C14:1 ω5c0.513.899
    59430C16:0 2OH1.117.233
    59430C16:0 3OH0.517.52
    59430C16:1 ω5c0.715.908
    59430C16:1 ω7c21.815.819
    59430C17:0 CYCLO16.416.888
    59430C18:1 2OH1.619.088
    59430C18:1 ω7c /12t/9t4.217.824
    59430C18:2 ω6,9c/C18:0 ANTE0.617.724
    59430C19:0 CYCLO ω8c0.618.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59430-+++-+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
59430+-------------+-++--+

Isolation, sampling and environmental information

isolation

  • @ref: 59430
  • sample type: Human sputum,32-yr-old woman,cystic fibrosis
  • sampling date: 2005-11-22
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Sputum
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 59430

culture collection no.: CCUG 52123

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59430Curators of the CCUGhttps://www.ccug.se/strain?id=52123Culture Collection University of Gothenburg (CCUG) (CCUG 52123)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym