Strain identifier

BacDive ID: 154019

Type strain: No

Species: Tsukamurella pulmonis

NCBI tax ID(s): 47312 (species)

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General

@ref: 59398

BacDive-ID: 154019

keywords: Bacteria, microaerophile, mesophilic

description: Tsukamurella pulmonis CCUG 52011 is a microaerophile, mesophilic bacterium that was isolated from Human blood,8-yr-old girl,neutropenia.

NCBI tax id

  • NCBI tax id: 47312
  • Matching level: species

doi: 10.13145/bacdive154019.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Tsukamurellaceae
  • genus: Tsukamurella
  • species: Tsukamurella pulmonis
  • full scientific name: Tsukamurella pulmonis Yassin et al. 1996

  • synonyms

    • @ref: 20215
    • synonym: Tsukamurella spongiae

@ref: 59398

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Tsukamurellaceae

genus: Tsukamurella

species: Tsukamurella pulmonis

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59398
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 59398
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917992sucrose-fermentation
6837917716lactose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
683795291gelatin-hydrolysis
6837916199urea-hydrolysis
6837917632nitrate-reduction
6837928087glycogen-fermentation
6837917634D-glucose-fermentation
683794853esculin+hydrolysis

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379alpha-glucosidase+3.2.1.20
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59398C12:01.312
    59398C14:07.214
    59398C16:025.516
    59398C18:01.918
    59398C16:0 anteiso1.915.717
    59398C16:1 ω7c/C15:0 ISO 2OH21.315.85
    59398C18:1 ω9c25.217.769
    59398C18:2 ω6,9c/C18:0 ANTE8.317.724
    59398C20:1 ω9c119.77
    59398TBSA 10Me18:06.318.392
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
59398-+-+--+-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59398-+++-+----++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 59398
  • sample type: Human blood,8-yr-old girl,neutropenia
  • sampling date: 2005-11-08
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Patient
#Host#Human#Child

External links

@ref: 59398

culture collection no.: CCUG 52011

straininfo link

  • @ref: 107734
  • straininfo: 410712

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59398Curators of the CCUGhttps://www.ccug.se/strain?id=52011Culture Collection University of Gothenburg (CCUG) (CCUG 52011)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
107734Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID410712.1