Strain identifier

BacDive ID: 153992

Type strain: No

Species: Staphylococcus aureus

NCBI tax ID(s): 1280 (species)

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General

@ref: 59350

BacDive-ID: 153992

keywords: genome sequence, Bacteria, aerobe, mesophilic, Gram-positive

description: Staphylococcus aureus CCUG 51870 is an aerobe, mesophilic, Gram-positive bacterium of the family Staphylococcaceae.

NCBI tax id

  • NCBI tax id: 1280
  • Matching level: species

doi: 10.13145/bacdive153992.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus aureus
  • full scientific name: Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Staphylococcus aureus subsp. anaerobius

@ref: 59350

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus aureus

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 100

Culture and growth conditions

culture temp

  • @ref: 59350
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59350
  • oxygen tolerance: aerobe

spore formation

@refspore formationconfidence
69480no99.46
69481no96

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea-hydrolysis
6837529016arginine+hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose+fermentation
6837516899D-mannitol+fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose+fermentation
6837522599arabinose-fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose+builds acid from
6837816024D-mannose+builds acid from
6837817306maltose+builds acid from
6837817716lactose+builds acid from
6837827082trehalose+builds acid from
6837816899D-mannitol+builds acid from
6837817151xylitol+builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose+builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose-builds acid from
68378320061methyl alpha-D-glucopyranoside+builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine+hydrolysis
6837816199urea+hydrolysis

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistant
6837528368novobiocinyesyes1.8 µg
68378lysostaphinyesyes

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinyes
6837515688acetoinyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin+
6837515688acetoin+

enzymes

@refvalueactivityec
68378urease+3.5.1.5
68378arginine dihydrolase+3.5.3.6
68378alkaline phosphatase+3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59350C16:0216
    59350C18:02.618
    59350C20:00.320
    59350C14:0 ISO1.613.618
    59350C15:0 ANTEISO55.114.711
    59350C15:0 ISO514.621
    59350C16:0 iso2.215.626
    59350C17:0 anteiso19.316.722
    59350C17:0 iso2.616.629
    59350C18:0 ISO0.617.632
    59350C18:1 ω9c217.769
    59350C18:2 ω6,9c/C18:0 ANTE3.917.724
    59350C19:0 ANTEISO1.218.729
    59350C20:2 ω6,9c1.119.735
    59350Unidentified0.619.809
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
59350-+--+++++++---++--+--+++--

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
59350-+++++++--+++--+-+++

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Staphylococcus aureus NCTC10657GCA_900458395contigncbi1280
66792Staphylococcus aureus strain NCTC106571280.18120wgspatric1280

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno96no
motileno90.051no
gram-positiveyes89.054no
anaerobicno99.464yes
aerobicyes89.641yes
halophileyes93.983no
spore-formingno93.159no
thermophileno99.679yes
glucose-utilyes88.075no
flagellatedno91.324no
glucose-fermentyes85.751no

External links

@ref: 59350

culture collection no.: CCUG 51870, ATCC 13566, NCTC 10657, CCUG 9129

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59350Curators of the CCUGhttps://www.ccug.se/strain?id=51870Culture Collection University of Gothenburg (CCUG) (CCUG 51870)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1