Strain identifier
BacDive ID: 153924
Type strain: 
Species: Aggregatibacter actinomycetemcomitans
NCBI tax ID(s): 714 (species)
version 8.1 (current version)
General
@ref: 59274
BacDive-ID: 153924
keywords: genome sequence, Bacteria, microaerophile, mesophilic
description: Aggregatibacter actinomycetemcomitans CCUG 51668 is a microaerophile, mesophilic bacterium that was isolated from Human dental plaque.
NCBI tax id
- NCBI tax id: 714
- Matching level: species
doi: 10.13145/bacdive153924.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Aggregatibacter
- species: Aggregatibacter actinomycetemcomitans
- full scientific name: Aggregatibacter actinomycetemcomitans (Klinger 1912) Nørskov-Lauritsen and Kilian 2006
synonyms
@ref synonym 20215 Bacterium actinomycetemcomitans 20215 Haemophilus actinomycetemcomitans 20215 Actinobacillus actinomycetemcomitans
@ref: 59274
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Aggregatibacter
species: Aggregatibacter actinomycetemcomitans
type strain: no
Culture and growth conditions
culture temp
- @ref: 59274
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 59274
- oxygen tolerance: microaerophile
Isolation, sampling and environmental information
isolation
- @ref: 59274
- sample type: Human dental plaque
- country: Finland
- origin.country: FIN
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Oral cavity and airways | #Plaque |
| #Host Body Product | #Oral cavity and Airways | #Dental plaque |
Sequence information
Genome sequences
- @ref: 66792
- description: Aggregatibacter actinomycetemcomitans strain HK_929
- accession: 714.286
- assembly level: wgs
- database: patric
- NCBI tax ID: 714
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| gram-positive | no | 98.641 | no |
| anaerobic | no | 93.328 | no |
| halophile | no | 52.756 | no |
| spore-forming | no | 98.604 | no |
| glucose-util | yes | 53.043 | no |
| thermophile | no | 96.756 | yes |
| flagellated | no | 96.935 | no |
| aerobic | no | 96.615 | yes |
| glucose-ferment | no | 52.735 | no |
| motile | no | 88.714 | no |
External links
@ref: 59274
culture collection no.: CCUG 51668
straininfo link
- @ref: 107650
- straininfo: 303003
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 59274 | Curators of the CCUG | https://www.ccug.se/strain?id=51668 | Culture Collection University of Gothenburg (CCUG) (CCUG 51668) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 107650 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID303003.1 |