Strain identifier
BacDive ID: 15388
Type strain: 
Species: Streptomyces lusitanus
Strain history: KCC S-0785 <-- IFO 13464 <-- SAJ <-- ISP 5568 <-- NCIB 9585 <-- I. Villax.
NCBI tax ID(s): 68232 (species)
General
@ref: 9650
BacDive-ID: 15388
DSM-Number: 40568
keywords: 16S sequence, Bacteria, mesophilic, antibiotic compound production
description: Streptomyces lusitanus DSM 40568 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.
NCBI tax id
- NCBI tax id: 68232
- Matching level: species
strain history
| @ref | history |
|---|---|
| 9650 | <- E.B. Shirling, ISP <- NCIB <- I. Villax |
| 67770 | KCC S-0785 <-- IFO 13464 <-- SAJ <-- ISP 5568 <-- NCIB 9585 <-- I. Villax. |
doi: 10.13145/bacdive15388.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces lusitanus
- full scientific name: Streptomyces lusitanus Villax 1963 (Approved Lists 1980)
@ref: 9650
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces lusitanus
full scientific name: Streptomyces lusitanus Villax 1963
type strain: yes
Morphology
multimedia
- @ref: 9650
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40568.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9650 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9650 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9650 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 9650 | 7 chlortetracycline |
| 9650 | tetracycline |
metabolite production
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 67770 | 27644 | chlortetracycline | yes |
| 67770 | 27902 | tetracycline | yes |
Isolation, sampling and environmental information
isolation
- @ref: 9650
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 9650
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces lusitanus gene for 16S rRNA, partial sequence | AB122766 | 565 | ena | 68232 |
| 20218 | Streptomyces lusitanus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4785 | D44360 | 121 | ena | 68232 |
| 20218 | Streptomyces lusitanus gene for 16S rRNA, partial sequence, strain: NBRC 13464 | AB184424 | 1444 | ena | 68232 |
| 20218 | Streptomyces lusitanus strain NRRL B-5637T 16S ribosomal RNA gene, partial sequence | DQ442524 | 1298 | ena | 68232 |
External links
@ref: 9650
culture collection no.: DSM 40568, ATCC 15842, ATCC 27444, CBS 765.72, IFO 13464, ISP 5568, JCM 4785, KCC S-0785, NBRC 13464, NCIB 9585, RIA 1425, BCRC 11552, IFO 13314, KCTC 19072, NBRC 13314, NCIMB 9585, NRRL B-12501, NRRL B-5637, VKM Ac-1194, VTT E-011976
straininfo link
- @ref: 84478
- straininfo: 389358
literature
- topic: Phylogeny
- Pubmed-ID: 22080411
- title: Streptomyces deserti sp. nov., isolated from hyper-arid Atacama Desert soil.
- authors: Santhanam R, Okoro CK, Rong X, Huang Y, Bull AT, Andrews BA, Asenjo JA, Weon HY, Goodfellow M
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-011-9672-0
- year: 2011
- mesh: Carbon/metabolism, Chile, Culture Media, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, *Desert Climate, Humidity, Molecular Sequence Data, Nitrogen/metabolism, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Ribotyping, Sequence Alignment, Sequence Homology, Nucleic Acid, *Soil Microbiology, Species Specificity, Streptomyces/classification/genetics/growth & development/*isolation & purification/metabolism
- topic2: Metabolism
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9650 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40568) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40568 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 84478 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID389358.1 | StrainInfo: A central database for resolving microbial strain identifiers |