Strain identifier
BacDive ID: 15387
Type strain:
Species: Streptomyces luridus
Strain history: <- E.B. Shirling, ISP <- V.D. Kuznetsov, INMI
NCBI tax ID(s): 67320 (species)
General
@ref: 9294
BacDive-ID: 15387
DSM-Number: 40081
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces luridus DSM 40081 is a mesophilic bacterium of the family Streptomycetaceae.
NCBI tax id
- NCBI tax id: 67320
- Matching level: species
strain history
- @ref: 9294
- history: <- E.B. Shirling, ISP <- V.D. Kuznetsov, INMI
doi: 10.13145/bacdive15387.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces luridus
- full scientific name: Streptomyces luridus (Krassilnikov et al. 1957) Waksman 1961 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Actinomyces luridus
@ref: 9294
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces luridus
full scientific name: Streptomyces luridus (Krassilnikov et al. 1957) Waksman 1961
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9294 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
9294 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
18526 | positive | optimum | 28 | mesophilic |
9294 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
@ref | compound |
---|---|
9294 | luridin |
20216 | Luridin |
halophily
- @ref: 18526
- salt: NaCl
- growth: positive
- tested relation: maximum
- concentration: 5 %
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
18526 | 17234 | glucose | + | |
18526 | 22599 | arabinose | - | |
18526 | 17992 | sucrose | - | |
18526 | 18222 | xylose | +/- | |
18526 | 17268 | myo-inositol | +/- | |
18526 | 29864 | mannitol | - | |
18526 | 28757 | fructose | - | |
18526 | 26546 | rhamnose | - | |
18526 | 16634 | raffinose | - | |
18526 | 62968 | cellulose | - | |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68368 | 15688 | acetoin | yes |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
---|---|---|---|---|
68368 | 15688 | acetoin | + | |
68368 | 35581 | indole | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68368 | gelatinase | - | |
68368 | tryptophan deaminase | + | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL |
---|---|---|---|---|---|---|---|---|---|---|---|
18526 | - | - | - | - | - | - | - | + | - | + | - |
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
18526 | 1 | German classification |
9294 | 1 | Risk group (German classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces luridus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4591 | D44252 | 120 | ena | 67320 |
20218 | Streptomyces luridus gene for 16S rRNA, partial sequence, strain: NBRC 12793 | AB184150 | 1439 | ena | 67320 |
20218 | Streptomyces luridus strain NRRL B-5409T 16S ribosomal RNA gene, partial sequence | DQ442523 | 1472 | ena | 67320 |
External links
@ref: 9294
culture collection no.: DSM 40081, ATCC 19782, CBS 534.68, IFO 12793, INMI 111, ISP 5081, JCM 4591, NBRC 12793, RIA 1061
straininfo link
- @ref: 84477
- straininfo: 264396
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9294 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40081) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40081 | |||
18526 | Wink, J. | http://www.dsmz.de/microorganisms/wink_pdf/DSM40081.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20216 | Curators of the HKI | http://www.leibniz-hki.de/de/ | Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
68368 | Automatically annotated from API 20E | |||||
84477 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID264396.1 | StrainInfo: A central database for resolving microbial strain identifiers |