Strain identifier
version 9.2 (current version)
General
@ref: 59181
BacDive-ID: 153861
keywords: Bacteria, microaerophile, mesophilic
description: Nocardia farcinica CCUG 51417 is a microaerophile, mesophilic bacterium that was isolated from Human eye,keratitis.
NCBI tax id
- NCBI tax id: 37329
- Matching level: species
doi: 10.13145/bacdive153861.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia farcinica
- full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)
@ref: 59181
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Nocardiaceae
genus: Nocardia
species: Nocardia farcinica
type strain: no
Culture and growth conditions
culture temp
- @ref: 59181
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 59181
- oxygen tolerance: microaerophile
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 59181 C14:0 1 14 59181 C16:0 27.2 16 59181 C18:0 5.3 18 59181 C20:0 0.5 20 59181 C16:0 aldehyde 11.8 14.949 59181 C16:1 ω7c 0.5 15.819 59181 C16:1 ω7c/C15:0 ISO 2OH 12.6 15.85 59181 C17:1 ω9c 1.3 16.773 59181 C18:1 ω9c 5.5 17.769 59181 C18:2 ω6,9c/C18:0 ANTE 7.3 17.724 59181 C19:1 ω11c/19:1 ω9c 0.6 18.762 59181 C20:1 ω9c 1.9 19.77 59181 C20:4 ω6,9,12,15c 1.4 19.395 59181 TBSA 10Me18:0 18.5 18.392 59181 unknown 16.972 4.5 16.972 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
Isolation, sampling and environmental information
isolation
- @ref: 59181
- sample type: Human eye,keratitis
- sampling date: 2005-07-01
- geographic location: Tromsö
- country: Norway
- origin.country: NOR
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Organ | #Eye |
| #Infection | #Disease | |
| #Infection | #Patient |
External links
@ref: 59181
culture collection no.: CCUG 51417
straininfo link
- @ref: 107596
- straininfo: 303540
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 59181 | Curators of the CCUG | https://www.ccug.se/strain?id=51417 | Culture Collection University of Gothenburg (CCUG) (CCUG 51417) | |
| 107596 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID303540.1 |