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Strain identifier

BacDive ID: 15384

Type strain: Yes

Species: Streptomyces longisporus

Strain Designation: 4417/56

Strain history: KCC S-0395 <-- IFO 12885 <-- SAJ <-- ISP 5166 <-- INA 4417/56.

NCBI tax ID(s): 1948 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 9362

BacDive-ID: 15384

DSM-Number: 40166

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces longisporus 4417/56 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1948
  • Matching level: species

strain history

doi: 10.13145/bacdive15384.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptomycetales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces longisporus
  • full scientific name: Streptomyces longisporus (Krassilnikov 1941) Waksman 1953 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Actinomyces longisporus

@ref: 9362

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces longisporus

full scientific name: Streptomyces longisporus (Krassilnikov 1941) Waksman 1953

strain designation: 4417/56

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 9362
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
9362positivegrowth28mesophilic
67770positivegrowth28mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 9362
  • sample type: soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 9362
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces longisporus partial 16S rRNA gene, strain ISP 5166AJ3994751448ena1948
20218Streptomyces longisporus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4395D44110120ena1948
20218Streptomyces longisporus gene for 16S rRNA, partial sequence, strain: NBRC 12885AB1842191445ena1948

GC content

  • @ref: 67770
  • GC-content: 70.2
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 9362

culture collection no.: DSM 40166, ATCC 23931, CBS 916.68, IFO 12885, INA 4417/56, ISP 5166, JCM 4395, NBRC 12885, RIA 1134, BCRC 13776, CCT 5006, CGMCC 4.1738, IMET 43090, NRRL B-5336, PCM 2394, VKM Ac-1896

straininfo link

@refpassport
20218http://www.straininfo.net/strains/164914
20218http://www.straininfo.net/strains/123601
20218http://www.straininfo.net/strains/230181
20218http://www.straininfo.net/strains/123605
20218http://www.straininfo.net/strains/164916
20218http://www.straininfo.net/strains/123602
20218http://www.straininfo.net/strains/164917
20218http://www.straininfo.net/strains/334436
20218http://www.straininfo.net/strains/123607

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny20525817Streptomyces coacervatus sp. nov., isolated from the intestinal tract of Armadillidium vulgare.Shibazaki A, Omoto Y, Kudo T, Yaguchi T, Saito A, Ando A, Mikami Y, Gonoi TInt J Syst Evol Microbiol10.1099/ijs.0.019091-02010Animals, DNA, Bacterial/genetics, Fatty Acids/metabolism, Intestines/microbiology, Isopoda/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Streptomyces/*classification/genetics/*isolation & purification/metabolismMetabolism
Phylogeny32375929Streptomyces montanus sp. nov., a novel actinomycete isolated from soil.Jiang H, Han L, Li J, Yu M, Zhao J, Guo X, Xiang W, Wang XInt J Syst Evol Microbiol10.1099/ijsem.0.0041602020Actinobacteria/genetics, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Multilocus Sequence Typing, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/isolation & purification, Vitamin K 2/analogs & derivatives/chemistryTranscriptome

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9362Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40166)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40166
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/