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Strain identifier

BacDive ID: 153812

Type strain: No

Species: Pseudomonas mandelii

NCBI tax ID(s): 75612 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 59116

BacDive-ID: 153812

keywords: Bacteria, aerobe, mesophilic

description: Pseudomonas mandelii CCUG 51251 is an aerobe, mesophilic bacterium that was isolated from Human sputum,29-yr-old man,cystic fibrosis patient.

NCBI tax id

  • NCBI tax id: 75612
  • Matching level: species

doi: 10.13145/bacdive153812.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas mandelii
  • full scientific name: Pseudomonas mandelii Verhille et al. 1999

@ref: 59116

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas mandelii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 59116
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59116
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine+hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase+3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    59116C12:04.712
    59116C14:00.414
    59116C16:031.616
    59116C17:00.317
    59116C18:00.418
    59116C10:0 3OH3.811.423
    59116C12:0 2OH4.513.178
    59116C12:0 3OH3.913.455
    59116C16:1 ω7c20.215.819
    59116C17:0 CYCLO21.316.888
    59116C18:1 ω7c /12t/9t8.317.824
    59116C19:0 CYCLO ω8c0.618.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
59116-+++-++---++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
59116+--+----+++++-++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 59116
  • sample type: Human sputum,29-yr-old man,cystic fibrosis patient
  • sampling date: 2005-05-01
  • geographic location: Kalmar
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Sputum
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 59116

culture collection no.: CCUG 51251

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
59116Curators of the CCUGhttps://www.ccug.se/strain?id=51251Culture Collection University of Gothenburg (CCUG) (CCUG 51251)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym