Strain identifier

BacDive ID: 153690

Type strain: No

Species: Staphylococcus lugdunensis

NCBI tax ID(s): 28035 (species)

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General

@ref: 58933

BacDive-ID: 153690

keywords: Bacteria, aerobe, mesophilic

description: Staphylococcus lugdunensis CCUG 50660 is an aerobe, mesophilic bacterium that was isolated from Human thigh,80-yr-old man,necrotic tumour.

NCBI tax id

  • NCBI tax id: 28035
  • Matching level: species

doi: 10.13145/bacdive153690.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Staphylococcaceae
  • genus: Staphylococcus
  • species: Staphylococcus lugdunensis
  • full scientific name: Staphylococcus lugdunensis Freney et al. 1988

@ref: 58933

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Staphylococcaceae

genus: Staphylococcus

species: Staphylococcus lugdunensis

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58933
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 58933
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin-hydrolysis
6837916199urea+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose+fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation
6837516199urea-hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine+degradation
683754853esculin-hydrolysis
6837517634D-glucose+fermentation
6837515824D-fructose+fermentation
6837516024D-mannose+fermentation
6837517306maltose+fermentation
6837517716lactose+fermentation
6837527082trehalose+fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate+reduction
6837517992sucrose+fermentation
6837559640N-acetylglucosamine+fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose+builds acid from
6837816024D-mannose+builds acid from
6837817306maltose+builds acid from
6837817716lactose+builds acid from
6837827082trehalose+builds acid from
6837816899D-mannitol+builds acid from
6837817151xylitol-builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose+builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose-builds acid from
68378320061methyl alpha-D-glucopyranoside+builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine+hydrolysis
6837816199urea-hydrolysis

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837528368novobiocinyesyes1.8 µg
68378lysostaphinyesyes

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinno
6837515688acetoinyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin-
6837515688acetoin+

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase+3.5.3.6
68378alkaline phosphatase+3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase+3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase-
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase+4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease-3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease+3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58933C16:01.716
    58933C17:00.417
    58933C18:04.918
    58933C19:00.619
    58933C20:01.420
    58933C14:0 ISO213.618
    58933C15:0 ANTEISO50.214.711
    58933C15:0 ISO6.814.621
    58933C16:0 iso2.815.626
    58933C17:0 anteiso17.116.722
    58933C17:0 iso4.416.629
    58933C18:0 ISO0.617.632
    58933C18:1 ω9c0.417.769
    58933C18:2 ω6,9c/C18:0 ANTE0.417.724
    58933C19:0 ANTEISO4.618.729
    58933C19:0 ISO1.718.633
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
58933++++-----+--+---+++-+

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
58933--+-++++++----++---+-++---

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
58933-++++++---+-+--+-+--

Isolation, sampling and environmental information

isolation

  • @ref: 58933
  • sample type: Human thigh,80-yr-old man,necrotic tumour
  • sampling date: 2005-02-23
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Limb#Leg
#Infection#Patient

External links

@ref: 58933

culture collection no.: CCUG 50660

straininfo link

  • @ref: 107455
  • straininfo: 214615

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58933Curators of the CCUGhttps://www.ccug.se/strain?id=50660Culture Collection University of Gothenburg (CCUG) (CCUG 50660)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
107455Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214615.1