Strain identifier

BacDive ID: 153652

Type strain: No

Species: Aeromonas dhakensis

NCBI tax ID(s): 196024 (species)

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General

@ref: 58884

BacDive-ID: 153652

keywords: Bacteria, aerobe, mesophilic

description: Aeromonas dhakensis CCUG 50493 is an aerobe, mesophilic bacterium that was isolated from Human wound,38-yr-old man,tsunami victim.

NCBI tax id

  • NCBI tax id: 196024
  • Matching level: species

doi: 10.13145/bacdive153652.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas dhakensis
  • full scientific name: Aeromonas dhakensis (Huys et al. 2002) Beaz-Hidalgo et al. 2015

  • synonyms

    @refsynonym
    20215Aeromonas dhakensis
    20215Aeromonas hydrophila subsp. dhakensis
    20215Aeromonas aquariorum

@ref: 58884

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas dhakensis

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58884
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 58884
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose-builds acid from
6837427082trehalose-builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837417992sucrose+builds acid from
6837415792malonate-assimilation
6837418394palatinose-builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837416899D-mannitol-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine+hydrolysis
6837418257ornithine-degradation
6837417634D-glucose+builds acid from
6837427897tryptophan+energy source
6836830849L-arabinose-fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol-fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleyes
6836815688acetoinyes
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin+
6836835581indole+
6837435581indole+

enzymes

@refvalueactivityec
68374alpha-maltosidase+
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase+3.2.1.23
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68374L-aspartate arylamidase-3.4.11.21
68374alpha-galactosidase-3.2.1.22
68374N-acetyl-beta-glucosaminidase+3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase+3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58884C12:03.912
    58884C13:00.413
    58884C14:05.314
    58884C15:02.515
    58884C16:020.916
    58884C17:01.817
    58884C18:00.918
    58884C13:0 3OH/C15:1 i I/H0.214.469
    58884C13:0 iso0.612.612
    58884C13:0 ISO 2OH0.313.814
    58884C14:0 3OH/C16:1 ISO I5.115.485
    58884C15:0 ISO1.814.621
    58884C15:0 ISO 3OH0.616.135
    58884C15:1 ω6c0.214.856
    58884C16:0 iso1.115.626
    58884C16:1 ω7c32.815.819
    58884C16:1 ω7c alcohol0.915.386
    58884C17:0 anteiso0.216.722
    58884C17:0 iso1.416.629
    58884C17:1 ω6c0.516.862
    58884C17:1 ω8c2.116.792
    58884C17:1 ω9c ISO116.416
    58884C18:1 ω7c /12t/9t9.417.824
    58884C18:1 ω9c1.217.769
    58884C18:2 ω6,9c/C18:0 ANTE417.724
    58884Unidentified0.315.178
    58884unknown 14.5030.614.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
58884++------++++----+-+-+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
58884-+-----+-+-+----+++++---------+-

Isolation, sampling and environmental information

isolation

  • @ref: 58884
  • sample type: Human wound,38-yr-old man,tsunami victim
  • sampling date: 2004-12-28
  • country: Thailand
  • origin.country: THA
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 58884

culture collection no.: CCUG 50493

straininfo link

  • @ref: 107423
  • straininfo: 214488

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58884Curators of the CCUGhttps://www.ccug.se/strain?id=50493Culture Collection University of Gothenburg (CCUG) (CCUG 50493)
68368Automatically annotated from API 20E
68374Automatically annotated from API ID32E
107423Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214488.1