Strain identifier
BacDive ID: 15354
Type strain: 
Species: Streptomyces lavendulae subsp. lavendulae
Strain Designation: D-1
Strain history: <- R. E. Gordon, IMRU
NCBI tax ID(s): 58340 (subspecies)
General
@ref: 10035
BacDive-ID: 15354
DSM-Number: 41088
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces lavendulae subsp. lavendulae D-1 is a mesophilic bacterium that was isolated from Guatemala soil.
NCBI tax id
- NCBI tax id: 58340
- Matching level: subspecies
strain history
- @ref: 10035
- history: <- R. E. Gordon, IMRU
doi: 10.13145/bacdive15354.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces lavendulae subsp. lavendulae
- full scientific name: Streptomyces lavendulae subsp. lavendulae (Waksman and Curtis 1916) Pridham 1970 (Approved Lists 1980)
@ref: 10035
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces lavendulae subsp. lavendulae
full scientific name: Streptomyces lavendulae subsp. lavendulae (Waksman and Curtis 1916) Pridham 1970
strain designation: D-1
type strain: no
Morphology
multimedia
- @ref: 10035
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_41088.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 10035
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 10035
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Physiology and metabolism
compound production
- @ref: 10035
Isolation, sampling and environmental information
isolation
- @ref: 10035
- sample type: Guatemala soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_163.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_144;99_163&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: JN201954
- Sequence Identity:
- Total samples: 26399
- soil counts: 19336
- aquatic counts: 1680
- animal counts: 1702
- plant counts: 3681
Safety information
risk assessment
- @ref: 10035
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Streptomyces lavendulae subsp. lavendulae strain DSM41088 16S ribosomal RNA gene, partial sequence
- accession: JN201954
- length: 1403
- database: ena
- NCBI tax ID: 58340
External links
@ref: 10035
culture collection no.: DSM 41088, IMRU 3530
straininfo link
- @ref: 84446
- straininfo: 49897
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 10035 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41088) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41088 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 84446 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49897.1 | StrainInfo: A central database for resolving microbial strain identifiers |