Strain identifier
BacDive ID: 153514
Type strain:
Species: Staphylococcus hominis subsp. novobiosepticus
NCBI tax ID(s): 145393 (subspecies)
version 8.1 (current version)
General
@ref: 58715
BacDive-ID: 153514
keywords: Bacteria, aerobe, mesophilic
description: Staphylococcus hominis subsp. novobiosepticus CCUG 50004 is an aerobe, mesophilic bacterium that was isolated from Air,industry.
NCBI tax id
- NCBI tax id: 145393
- Matching level: subspecies
doi: 10.13145/bacdive153514.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus hominis subsp. novobiosepticus
- full scientific name: Staphylococcus hominis subsp. novobiosepticus Kloos et al. 1998
@ref: 58715
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus hominis subsp. novobiosepticus
type strain: no
Culture and growth conditions
culture temp
- @ref: 58715
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 58715
- oxygen tolerance: aerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68379 | 17632 | nitrate | + | reduction |
68379 | 4853 | esculin | - | hydrolysis |
68379 | 16199 | urea | + | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 17634 | D-glucose | + | fermentation |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | + | fermentation |
68379 | 17716 | lactose | + | fermentation |
68379 | 17992 | sucrose | + | fermentation |
68379 | 28087 | glycogen | - | fermentation |
68375 | 16199 | urea | + | hydrolysis |
68375 | 29016 | arginine | - | hydrolysis |
68375 | 18257 | ornithine | - | degradation |
68375 | 4853 | esculin | - | hydrolysis |
68375 | 17634 | D-glucose | + | fermentation |
68375 | 15824 | D-fructose | + | fermentation |
68375 | 16024 | D-mannose | - | fermentation |
68375 | 17306 | maltose | + | fermentation |
68375 | 17716 | lactose | + | fermentation |
68375 | 27082 | trehalose | - | fermentation |
68375 | 16899 | D-mannitol | - | fermentation |
68375 | 16634 | raffinose | - | fermentation |
68375 | 16988 | D-ribose | - | fermentation |
68375 | 17057 | cellobiose | - | fermentation |
68375 | 17632 | nitrate | + | reduction |
68375 | 17992 | sucrose | - | fermentation |
68375 | 59640 | N-acetylglucosamine | - | fermentation |
68375 | 32528 | turanose | - | fermentation |
68375 | 22599 | arabinose | - | fermentation |
68378 | 17634 | D-glucose | - | builds acid from |
68378 | 15824 | D-fructose | + | builds acid from |
68378 | 16024 | D-mannose | + | builds acid from |
68378 | 17306 | maltose | - | builds acid from |
68378 | 17716 | lactose | + | builds acid from |
68378 | 27082 | trehalose | + | builds acid from |
68378 | 16899 | D-mannitol | - | builds acid from |
68378 | 17151 | xylitol | - | builds acid from |
68378 | 28053 | melibiose | - | builds acid from |
68378 | 17632 | nitrate | - | reduction |
68378 | 16634 | raffinose | + | builds acid from |
68378 | 65327 | D-xylose | - | builds acid from |
68378 | 17992 | sucrose | - | builds acid from |
68378 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
68378 | 59640 | N-acetylglucosamine | - | builds acid from |
68378 | 29016 | arginine | + | hydrolysis |
68378 | 16199 | urea | - | hydrolysis |
antibiotic resistance
@ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. | is resistant |
---|---|---|---|---|---|---|
68375 | 28368 | novobiocin | yes | yes | 1.8 µg | |
68378 | lysostaphin | yes | yes |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68378 | 15688 | acetoin | yes |
68375 | 15688 | acetoin | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test |
---|---|---|---|
68378 | 15688 | acetoin | + |
68375 | 15688 | acetoin | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68378 | urease | - | 3.5.1.5 |
68378 | arginine dihydrolase | + | 3.5.3.6 |
68378 | alkaline phosphatase | + | 3.1.3.1 |
68375 | beta-glucuronidase | - | 3.2.1.31 |
68375 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68375 | alkaline phosphatase | - | 3.1.3.1 |
68375 | L-arginine arylamidase | - | |
68375 | beta-galactosidase | + | 3.2.1.23 |
68375 | beta-glucosidase | - | 3.2.1.21 |
68375 | ornithine decarboxylase | - | 4.1.1.17 |
68375 | arginine dihydrolase | - | 3.5.3.6 |
68375 | urease | + | 3.5.1.5 |
68379 | catalase | + | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | + | 3.5.1.5 |
68379 | beta-glucosidase | - | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-galactosidase | - | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68379 | pyrazinamidase | + | 3.5.1.B15 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 58715 C16:0 2.4 16 58715 C18:0 10.1 18 58715 C20:0 2.6 20 58715 C14:0 ISO 1.5 13.618 58715 C15:0 ANTEISO 39.8 14.711 58715 C15:0 ISO 8.7 14.621 58715 C16:0 iso 1.2 15.626 58715 C17:0 anteiso 15.5 16.722 58715 C17:0 iso 8 16.629 58715 C18:0 ISO 0.8 17.632 58715 C18:1 ω9c 1.1 17.769 58715 C18:2 ω6,9c/C18:0 ANTE 1.3 17.724 58715 C19:0 ANTEISO 4.5 18.729 58715 C19:0 ISO 2.5 18.633 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
58715 | + | + | + | + | - | - | + | - | - | + | - | - | + | - | - | - | + | + | + | - | + |
API ID32STA
@ref | URE | ADH Arg | ODC | ESC | GLU | FRU | MNE | MAL | LAC | TRE | MAN | RAF | RIB | CEL | NIT | VP | beta GAL | ArgA | PAL | PyrA | NOVO | SAC | NAG | TUR | ARA | beta GUR |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
58715 | + | - | - | - | + | + | - | + | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - |
API STA
@ref | GLU | FRU | MNE | MAL | LAC | TRE | MAN | XLT | MEL | NIT | PAL | VP | RAF | XYL | SAC | MDG | NAG | ADH | URE | LSTR |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
58715 | - | + | + | - | + | + | - | - | - | - | + | + | + | - | - | - | - | + | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 58715
- sample type: Air,industry
- sampling date: 2004-09-01
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 |
---|---|
#Engineered | #Industrial |
#Environmental | #Air |
External links
@ref: 58715
culture collection no.: CCUG 50004
straininfo link
- @ref: 107307
- straininfo: 215019
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
58715 | Curators of the CCUG | https://www.ccug.se/strain?id=50004 | Culture Collection University of Gothenburg (CCUG) (CCUG 50004) | |
68375 | Automatically annotated from API ID32STA | |||
68378 | Automatically annotated from API STA | |||
68379 | Automatically annotated from API Coryne | |||
107307 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID215019.1 |