Strain identifier

BacDive ID: 153513

Type strain: No

Species: Corynebacterium amycolatum

NCBI tax ID(s): 43765 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9.2 (current version):
version 9:
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 9.2 (current version)

General

@ref: 58713

BacDive-ID: 153513

keywords: Bacteria, aerobe, mesophilic

description: Corynebacterium amycolatum CCUG 50000 is an aerobe, mesophilic bacterium that was isolated from Dog ear.

NCBI tax id

  • NCBI tax id: 43765
  • Matching level: species

doi: 10.13145/bacdive153513.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Corynebacteriaceae
  • genus: Corynebacterium
  • species: Corynebacterium amycolatum
  • full scientific name: Corynebacterium amycolatum Collins et al. 1988

@ref: 58713

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Corynebacteriaceae

genus: Corynebacterium

species: Corynebacterium amycolatum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58713
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 58713
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837965327D-xylose-fermentation
6837917634D-glucose+fermentation
6837916988D-ribose+fermentation
683795291gelatin-hydrolysis
6837916199urea-hydrolysis
683794853esculin-hydrolysis
6837928087glycogen-fermentation
6837917992sucrose-fermentation
6837917716lactose-fermentation
6837917306maltose+fermentation
6837916899D-mannitol-fermentation
6837917632nitrate-reduction

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-galactosidase-3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382acid phosphatase-3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379alpha-glucosidase-3.2.1.20
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58713C13:00.313
    58713C14:01.214
    58713C15:08.515
    58713C16:018.316
    58713C17:09.917
    58713C18:03.818
    58713C16:1 ω3c0.415.933
    58713C16:1 ω7c1.715.819
    58713C16:1 ω9c0.415.774
    58713C17:1 ω8c13.316.792
    58713C18:1 ω9c15.717.769
    58713C18:2 ω6,9c/C18:0 ANTE24.217.724
    58713C19:1 ω11c/19:1 ω9c0.318.762
    58713C20:4 ω6,9,12,15c0.619.395
    58713Unidentified0.518.961
    58713Unidentified0.419.565
    58713Unidentified0.619.974
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
58713-+-+--------++--+---+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58713-+++-------+--------

Isolation, sampling and environmental information

isolation

  • @ref: 58713
  • sample type: Dog ear
  • geographic location: Scotland,Inverness
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Organ#Ear

External links

@ref: 58713

culture collection no.: CCUG 50000

straininfo link

  • @ref: 107306
  • straininfo: 214973

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58713Curators of the CCUGhttps://www.ccug.se/strain?id=50000Culture Collection University of Gothenburg (CCUG) (CCUG 50000)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
107306Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214973.1