Strain identifier

BacDive ID: 153485

Type strain: No

Species: Vibrio metschnikovii

NCBI tax ID(s): 28172 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 58681

BacDive-ID: 153485

keywords: Bacteria, mesophilic

description: Vibrio metschnikovii CCUG 49718 is a mesophilic bacterium that was isolated from Anopheles gambiae arabiensis stomach.

NCBI tax id

  • NCBI tax id: 28172
  • Matching level: species

doi: 10.13145/bacdive153485.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio metschnikovii
  • full scientific name: Vibrio metschnikovii Gamaleia 1888 (Approved Lists 1980)

@ref: 58681

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio metschnikovii

type strain: no

Morphology

colony morphology

  • @ref: 58681
  • incubation period: 1 day

Culture and growth conditions

culture temp

  • @ref: 58681
  • growth: positive
  • type: growth
  • temperature: 26-37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis
6837418257ornithine-degradation
6837429016arginine-hydrolysis
6837425094lysine-degradation
6837416199urea-hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837415792malonate-assimilation
6837427897tryptophan-energy source
6837417634D-glucose-builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol+builds acid from

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleno
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837435581indole-
6836815688acetoin-
6836835581indole-

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase-3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68368cytochrome oxidase-1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase-3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58681C12:015.612
    58681C14:0814
    58681C16:08.416
    58681C18:00.318
    58681C10:0 3OH0.711.423
    58681C11:0 3OH0.212.441
    58681C12:0 2OH0.413.178
    58681C12:0 3OH8.613.455
    58681C12:1 3OH0.313.289
    58681C13:0 3OH/C15:1 i I/H0.314.469
    58681C13:0 ISO 2OH1.213.814
    58681C14:0 3OH/C16:1 ISO I8.515.485
    58681C16:0 anteiso0.315.717
    58681C16:1 ω7c32.115.819
    58681C16:1 ω7c alcohol1.115.386
    58681C17:1 ω8c0.416.792
    58681C18:1 ω7c /12t/9t9.317.824
    58681C18:2 ω6,9c/C18:0 ANTE1.117.724
    58681Unidentified0.615.271
    58681Unidentified0.317.313
    58681unk. 18.846/19:1 ω6c0.618.846
    58681unknown 11.7980.311.798
    58681unknown 12.4861.512.486
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
58681-+--+-----+++-+-+----

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
58681-------+-+-+-------------+---++-

Isolation, sampling and environmental information

isolation

  • @ref: 58681
  • sample type: Anopheles gambiae arabiensis stomach
  • sampling date: 2003-11-01
  • geographic location: Suba district,Lwanda
  • country: Kenya
  • origin.country: KEN
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Host#Arthropoda#Insecta
#Host Body-Site#Gastrointestinal tract#Stomach

External links

@ref: 58681

culture collection no.: CCUG 49718

straininfo link

  • @ref: 107282
  • straininfo: 214884

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58681Curators of the CCUGhttps://www.ccug.se/strain?id=49718Culture Collection University of Gothenburg (CCUG) (CCUG 49718)
68368Automatically annotated from API 20E
68374Automatically annotated from API ID32E
107282Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214884.1