Strain identifier

BacDive ID: 15346

Type strain: No

Species: Streptomyces netropsis

Strain Designation: MA-52

Strain history: KCC S-0675 <-- RIA 739 <-- NRRL B-1990 <-- Merck Sharp & Dohme Res. Labs.; MA-52.

NCBI tax ID(s): 68190 (species)

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General

@ref: 9640

BacDive-ID: 15346

DSM-Number: 40558

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces netropsis MA-52 is a mesophilic bacterium of the family Streptomycetaceae.

NCBI tax id

  • NCBI tax id: 68190
  • Matching level: species

strain history

@refhistory
9640<- E.B. Shirling, ISP <- H.B. Woodruff, Merck Sharpe & Dohme, MA-52
67770KCC S-0675 <-- RIA 739 <-- NRRL B-1990 <-- Merck Sharp & Dohme Res. Labs.; MA-52.

doi: 10.13145/bacdive15346.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces netropsis
  • full scientific name: Streptomyces netropsis (Finlay et al. 1951) Witt and Stackebrandt 1991

  • synonyms

    @refsynonym
    20215Streptomyces flavopersicus
    20215Streptomyces kentuckensis
    20215Streptoverticillium syringium
    20215Streptomyces syringium
    20215Streptomyces colombiensis
    20215Streptomyces distallicus
    20215Streptoverticillium flavopersicum
    20215Streptoverticillium kentuckense
    20215Streptoverticillium distallicum
    20215Streptomyces netropsis
    20215Streptoverticillium netropsis
    20215Streptomyces syringius

@ref: 9640

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces netropsis

full scientific name: Streptomyces netropsis (Finlay et al. 1951) Witt and Stackebrandt 1991

strain designation: MA-52

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9640GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9640ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperature
9640positivegrowth28
67770positivegrowth28

Physiology and metabolism

metabolite production

  • @ref: 67770
  • Chebi-ID: 176843
  • metabolite: vitamin B12
  • production: yes

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_163.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_144;99_163&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: DQ026646
  • Sequence Identity:
  • Total samples: 26399
  • soil counts: 19336
  • aquatic counts: 1680
  • animal counts: 1702
  • plant counts: 3681

Safety information

risk assessment

  • @ref: 9640
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces lavendulae subsp. lavendulae gene for 16S rRNA, partial sequence, strain: NBRC 13454AB1844151474nuccore58340
20218Streptomyces colombiensis strain NRRL B-1990 16S ribosomal RNA gene, partial sequenceDQ0266461528nuccore68190
20218Streptomyces lavendulae subsp. lavendulae strain DSM40558 16S ribosomal RNA gene, partial sequenceJN2019531335nuccore58340
124043Streptomyces colombiensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4740.D44324120nuccore68190

External links

@ref: 9640

culture collection no.: DSM 40558, ATCC 27425, CBS 755.72, IFO 13454, ISP 5558, KCC S-0675, KCC S-0740, NBRC 13454, NRRL B-1990, RIA 1415, JCM 4675, BCRC 15197, CGMCC 4.1651, JCM 4740, KCTC 9714, RIA 739, VKM Ac-1214

straininfo link

  • @ref: 84439
  • straininfo: 44759

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9640Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40558)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40558
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
84439Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID44759.1StrainInfo: A central database for resolving microbial strain identifiers
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy