Archive BacDiveID:10.13145/bacdive153439.20230509.8.1

Strain identifier

BacDive ID: 153439

Type strain:

Species: Streptococcus mitis

NCBI tax ID(s): 28037 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 58623

BacDive-ID: 153439

keywords: genome sequence, Bacteria, microaerophile, mesophilic

description: Streptococcus mitis CCUG 49591 is a microaerophile, mesophilic bacterium that was isolated from Human sputum,57-yr-old woman.

NCBI tax id

NCBI tax id: 28037
Matching level: species

doi: 10.13145/bacdive153439.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus mitis
full scientific name: Streptococcus mitis Andrewes and Horder 1906 (Approved Lists 1980)

@ref: 58623

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Streptococcaceae

genus: Streptococcus

species: Streptococcus mitis

type strain: no

Morphology

cell morphology

@ref	motility	confidence	gram stain
69480	no	95.481
69480		100	positive

Culture and growth conditions

culture temp

@ref: 58623
growth: positive
type: growth
temperature: 37
range: mesophilic

Physiology and metabolism

oxygen tolerance

@ref: 58623
oxygen tolerance: microaerophile

spore formation

@ref	spore formation	confidence
69480	no	99.934
69481	no	100

Isolation, sampling and environmental information

isolation

@ref: 58623
sample type: Human sputum,57-yr-old woman
sampling date: 2004-07-01
geographic location: Göteborg
country: Sweden
origin.country: SWE
continent: Europe

isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Female
#Host Body Product	#Fluids	#Sputum
#Infection	#Patient

Sequence information

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Streptococcus sp. CCUG 49591	GCA_001650315	scaffold	ncbi	1860161
66792	Streptococcus sp. CCUG 49591	1860161.3	wgs	patric	1860161

Genome-based predictions

predictions

trait	prediction	confidence	training_data
spore-forming	no	100	no
flagellated	no	95.753	no
gram-positive	yes	94.65	no
anaerobic	no	96.018	yes
halophile	yes	80.214	no
spore-forming	no	93.565	no
glucose-util	yes	82.802	no
motile	no	95.075	no
aerobic	no	96.603	yes
thermophile	no	99.625	yes
glucose-ferment	yes	87.077	no

External links

@ref: 58623

culture collection no.: CCUG 49591

straininfo link

@ref: 107243
straininfo: 214732

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
58623	Curators of the CCUG		https://www.ccug.se/strain?id=49591	Culture Collection University of Gothenburg (CCUG) (CCUG 49591)
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69480	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
69481	Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch	Predictions based on the model GenomeNet Sporulation v. 1	10.21203/rs.3.rs-2527258/v1
107243	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID214732.1