Strain identifier

BacDive ID: 153375

Type strain: No

Species: Microbacterium sp.

NCBI tax ID(s): 51671 (species)

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General

@ref: 58532

BacDive-ID: 153375

keywords: Bacteria, microaerophile, mesophilic

description: Microbacterium sp. CCUG 49373 is a microaerophile, mesophilic bacterium that was isolated from Human blood,12-yr-old male,cancer patient.

NCBI tax id

  • NCBI tax id: 51671
  • Matching level: species

doi: 10.13145/bacdive153375.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Microbacterium
  • species: Microbacterium sp.
  • full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Aureobacterium

@ref: 58532

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58532
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 58532
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose+fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase+3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58532C16:02.516
    58532C18:00.718
    58532C14:0 ISO0.413.618
    58532C15:0 ANTEISO40.914.711
    58532C15:0 ISO7.514.621
    58532C16:0 iso16.315.626
    58532C17:0 2OH0.218.249
    58532C17:0 anteiso26.516.722
    58532C17:0 iso2.816.629
    58532C18:1 ω9c0.417.769
    58532C18:2 ω6,9c/C18:0 ANTE0.717.724
    58532Unidentified0.218.65
    58532Unidentified0.419.063
    58532unknown 16.9720.416.972
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
58532-+-+-++++-+------+--+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58532-----+-------+-+-+++

Isolation, sampling and environmental information

isolation

  • @ref: 58532
  • sample type: Human blood,12-yr-old male,cancer patient
  • sampling date: 2004-05-01
  • geographic location: Luleå
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient
#Host#Human#Child

External links

@ref: 58532

culture collection no.: CCUG 49373

straininfo link

  • @ref: 107187
  • straininfo: 214586

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58532Curators of the CCUGhttps://www.ccug.se/strain?id=49373Culture Collection University of Gothenburg (CCUG) (CCUG 49373)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
107187Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214586.1