Strain identifier

BacDive ID: 153255

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 58390

BacDive-ID: 153255

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 48899 is a microaerophile, mesophilic bacterium that was isolated from Human blood.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive153255.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 58390

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58390
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 58390
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose-builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58390C14:00.614
    58390C16:02.316
    58390C18:01.418
    58390C13:0 iso0.712.612
    58390C13:1 at 12-130.712.931
    58390C15:0 ANTEISO1.314.711
    58390C15:0 ISO65.114.621
    58390C15:0 ISO 3OH216.135
    58390C16:0 3OH1.817.52
    58390C16:0 iso0.215.626
    58390C16:1 ω7c0.315.819
    58390C17:0 iso0.216.629
    58390C17:0 iso 3OH10.918.161
    58390C18:1 ω9c2.417.769
    58390C18:2 ω6,9c/C18:0 ANTE3.717.724
    58390Unidentified0.2
    58390Unidentified0.3
    58390unknown 11.5410.311.541
    58390unknown 13.566513.566
    58390unknown 16.5800.716.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58390-++--++-+-++-----+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
58390--------++---

Isolation, sampling and environmental information

isolation

  • @ref: 58390
  • sample type: Human blood
  • geographic location: Marseille
  • country: France
  • origin.country: FRA
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

External links

@ref: 58390

culture collection no.: CCUG 48899

straininfo link

  • @ref: 107085
  • straininfo: 215083

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58390Curators of the CCUGhttps://www.ccug.se/strain?id=48899Culture Collection University of Gothenburg (CCUG) (CCUG 48899)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
107085Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID215083.1