Strain identifier
BacDive ID: 15302
Type strain: 
Species: Streptomyces hiroshimensis
Strain history: KCC S-0926 <-- NRRL 3117 <-- Upjohn Co., USA; UC 2459.
NCBI tax ID(s): 173832 (subspecies)
version 8.1 (current version)
General
@ref: 9881
BacDive-ID: 15302
DSM-Number: 40905
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces hiroshimensis DSM 40905 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 173832
- Matching level: subspecies
strain history
| @ref | history |
|---|---|
| 9881 | <- NRRL <- Universitá Catholica del S. Cuore, UC 2459 |
| 67770 | KCC S-0926 <-- NRRL 3117 <-- Upjohn Co., USA; UC 2459. |
doi: 10.13145/bacdive15302.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces hiroshimensis
- full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Actinomyces biverticillatus 20215 Actinomyces rectiverticillatus 20215 Streptomyces fervens 20215 Streptomyces hiroshimensis 20215 Streptoverticillium salmonicida 20215 Streptoverticillium fervens 20215 Streptoverticillium hiroshimense 20215 Streptoverticillium roseoverticillatum 20215 Streptoverticillium rectiverticillatum 20215 Streptomyces roseoverticillatus 20215 Streptomyces spitsbergensis 20215 Streptoverticillium aureoversales 20215 Streptoverticillium fervens subsp. melrosporus 20215 Streptoverticillium aureoversile 20215 Streptoverticillium salmonis 20215 Streptoverticillium biverticillatum 20215 Streptomyces aureoversales 20215 Streptomyces biverticillatus 20215 Streptomyces fervens subsp. melrosporus 20215 Streptomyces salmonis 20215 Streptomyces aureoversilis 20215 Streptomyces rectiverticillatus
@ref: 9881
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces hiroshimensis
full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9881 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9881 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 9881 | positive | growth | 37 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 9881 | melrosporin |
| 9881 | antibiotic U-22956 |
| 67770 | Antibiotic U-22,956 |
| 67770 | melrosporin |
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 9881 | soil | Italy | ITA | Europe |
| 67770 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 9881
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces roseoverticillatus gene for 16S rRNA, partial sequence, strain: NBRC 15920 | AB184715 | 1475 | ena | 66429 |
| 20218 | Streptomyces roseoverticillatus subsp. melrosporus strain NRRL 3117 16S ribosomal RNA gene, partial sequence | AY999912 | 1318 | ena | 173832 |
External links
@ref: 9881
culture collection no.: DSM 40905, IFO 15920, IPV 2022, JCM 4926, KCC S-0926, NBRC 15920, NRRL 3117, BCRC 12454, NCIMB 9656
straininfo link
- @ref: 84396
- straininfo: 49823
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9881 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40905) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40905 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 84396 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49823.1 | StrainInfo: A central database for resolving microbial strain identifiers |