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Strain identifier

BacDive ID: 153013

Type strain: No

Species: Achromobacter sp.

NCBI tax ID(s): 134375 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 58063

BacDive-ID: 153013

keywords: Bacteria, mesophilic

description: Achromobacter sp. CCUG 48279 is a mesophilic bacterium that was isolated from Human ear,extern otitis.

NCBI tax id

  • NCBI tax id: 134375
  • Matching level: species

doi: 10.13145/bacdive153013.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter sp.
  • full scientific name: Achromobacter Yabuuchi and Yano 1981

@ref: 58063

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58063
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58063C12:00.912
    58063C14:02.814
    58063C15:00.415
    58063C16:036.116
    58063C17:00.817
    58063C18:01.918
    58063C12:0 2OH2.113.178
    58063C13:1 at 12-130.212.931
    58063C14:0 2OH1.515.205
    58063C14:0 3OH/C16:1 ISO I5.215.485
    58063C16:0 2OH0.417.233
    58063C16:0 3OH0.217.52
    58063C16:1 ω7c17.915.819
    58063C17:0 CYCLO21.116.888
    58063C18:1 ω7c /12t/9t6.217.824
    58063C18:2 ω6,9c/C18:0 ANTE0.517.724
    58063C19:0 CYCLO ω8c0.618.9
    58063Unidentified1.410.916
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58063-++--+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
58063+-------+-----+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 58063
  • sample type: Human ear,extern otitis
  • sampling date: 2003-09-01
  • geographic location: Tromsö
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Organ#Ear
#Infection#Disease
#Infection#Patient

External links

@ref: 58063

culture collection no.: CCUG 48279

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58063Curators of the CCUGhttps://www.ccug.se/strain?id=48279Culture Collection University of Gothenburg (CCUG) (CCUG 48279)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym