Strain identifier

BacDive ID: 153013

Type strain: No

Species: Achromobacter sp.

NCBI tax ID(s): 134375 (species)

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General

@ref: 58063

BacDive-ID: 153013

keywords: Bacteria, mesophilic

description: Achromobacter sp. CCUG 48279 is a mesophilic bacterium that was isolated from Human ear,extern otitis.

NCBI tax id

  • NCBI tax id: 134375
  • Matching level: species

doi: 10.13145/bacdive153013.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter sp.
  • full scientific name: Achromobacter Yabuuchi and Yano 1981

@ref: 58063

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 58063
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    58063C12:00.912
    58063C14:02.814
    58063C15:00.415
    58063C16:036.116
    58063C17:00.817
    58063C18:01.918
    58063C12:0 2OH2.113.178
    58063C13:1 at 12-130.212.931
    58063C14:0 2OH1.515.205
    58063C14:0 3OH/C16:1 ISO I5.215.485
    58063C16:0 2OH0.417.233
    58063C16:0 3OH0.217.52
    58063C16:1 ω7c17.915.819
    58063C17:0 CYCLO21.116.888
    58063C18:1 ω7c /12t/9t6.217.824
    58063C18:2 ω6,9c/C18:0 ANTE0.517.724
    58063C19:0 CYCLO ω8c0.618.9
    58063Unidentified1.410.916
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
58063-++--+----+---------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
58063+-------+-----+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 58063
  • sample type: Human ear,extern otitis
  • sampling date: 2003-09-01
  • geographic location: Tromsö
  • country: Norway
  • origin.country: NOR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Organ#Ear
#Infection#Disease
#Infection#Patient

External links

@ref: 58063

culture collection no.: CCUG 48279

straininfo link

  • @ref: 106884
  • straininfo: 215118

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
58063Curators of the CCUGhttps://www.ccug.se/strain?id=48279Culture Collection University of Gothenburg (CCUG) (CCUG 48279)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
106884Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID215118.1