Strain identifier
version 8.1 (current version)
General
@ref: 58037
BacDive-ID: 152993
keywords: genome sequence, Bacteria, aerobe, mesophilic, motile
description: Roseateles aquatilis CCUG 48205 is an aerobe, mesophilic, motile bacterium that was isolated from Water .
NCBI tax id
- NCBI tax id: 431061
- Matching level: species
doi: 10.13145/bacdive152993.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Roseateles
- species: Roseateles aquatilis
- full scientific name: Roseateles aquatilis Gomila et al. 2008
@ref: 58037
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Roseateles
species: Roseateles aquatilis
type strain: yes
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 97.662 | |
| 69480 | 99.987 | negative |
Culture and growth conditions
culture temp
- @ref: 58037
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 58037
- oxygen tolerance: aerobe
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.986 |
| 69481 | no | 99 |
Isolation, sampling and environmental information
isolation
- @ref: 58037
- sample type: Water (industry)
- sampling date: 2003-09-01
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 |
|---|---|
| #Engineered | #Industrial |
| #Environmental | #Aquatic |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Roseateles aquatilis CCUG 48205 | GCA_002205645 | contig | ncbi | 431061 |
| 66792 | Roseateles aquatilis strain CCUG 48205 | 431061.3 | wgs | patric | 431061 |
| 66792 | Roseateles aquatilis CCUG 48205 | 2831471034 | draft | img | 431061 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 99 | no |
| gram-positive | no | 98.22 | no |
| anaerobic | no | 98.977 | no |
| halophile | no | 97.704 | no |
| spore-forming | no | 93.228 | no |
| glucose-util | yes | 85.327 | no |
| aerobic | yes | 94.209 | yes |
| thermophile | no | 99.344 | yes |
| motile | yes | 89.541 | no |
| flagellated | yes | 77.056 | no |
| glucose-ferment | no | 90.348 | no |
External links
@ref: 58037
culture collection no.: CCUG 48205, CECT 7248
straininfo link
- @ref: 106867
- straininfo: 215067
literature
- topic: Phylogeny
- Pubmed-ID: 18175673
- title: Description of Roseateles aquatilis sp. nov. and Roseateles terrae sp. nov., in the class Betaproteobacteria, and emended description of the genus Roseateles.
- authors: Gomila M, Bowien B, Falsen E, Moore ER, Lalucat J
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.65169-0
- year: 2008
- mesh: Bacterial Typing Techniques, Comamonadaceae/*classification/genetics/isolation & purification/physiology, DNA, Bacterial/analysis, DNA, Ribosomal Spacer/analysis, Fatty Acids/analysis, Fresh Water/*microbiology, Genotype, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 58037 | Curators of the CCUG | https://www.ccug.se/strain?id=48205 | Culture Collection University of Gothenburg (CCUG) (CCUG 48205) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 106867 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID215067.1 |