Strain identifier
BacDive ID: 15298
Type strain:
Species: Streptomyces hiroshimensis
Strain history: KCC S-0511 <-- IFO 13079 <-- SAJ <-- ISP 5436 <-- INMI 380.
NCBI tax ID(s): 173860 (species)
General
@ref: 9544
BacDive-ID: 15298
DSM-Number: 40436
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces hiroshimensis DSM 40436 is a mesophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 173860
- Matching level: species
strain history
@ref | history |
---|---|
9544 | <- E.B. Shirling, ISP <- N.A. Krassilnikov, INMI |
67770 | KCC S-0511 <-- IFO 13079 <-- SAJ <-- ISP 5436 <-- INMI 380. |
doi: 10.13145/bacdive15298.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces hiroshimensis
- full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptoverticillium salmonis 20215 Streptomyces roseoverticillatus 20215 Actinomyces biverticillatus 20215 Streptomyces aureoversales 20215 Streptoverticillium salmonicida 20215 Streptomyces biverticillatus 20215 Streptomyces fervens subsp. melrosporus 20215 Streptomyces salmonis 20215 Streptomyces aureoversilis 20215 Streptomyces rectiverticillatus 20215 Streptoverticillium fervens 20215 Streptomyces fervens 20215 Streptomyces hiroshimensis 20215 Streptoverticillium biverticillatum 20215 Streptoverticillium hiroshimense 20215 Streptoverticillium roseoverticillatum 20215 Streptoverticillium rectiverticillatum 20215 Actinomyces rectiverticillatus 20215 Streptomyces spitsbergensis 20215 Streptoverticillium aureoversales 20215 Streptoverticillium fervens subsp. melrosporus 20215 Streptoverticillium aureoversile
@ref: 9544
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces hiroshimensis
full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
type strain: no
Morphology
multimedia
- @ref: 9544
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40436.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9544 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
9544 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
@ref | growth | type | temperature |
---|---|---|---|
9544 | positive | growth | 28 |
67770 | positive | growth | 28 |
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
Safety information
risk assessment
- @ref: 9544
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces rectiverticillatus gene for 16S rRNA, partial sequence, strain: NBRC 13079 | AB184296 | 1475 | nuccore | 173860 |
20218 | Streptomyces rectiverticillatus strain NRRL B-12369 16S ribosomal RNA gene, partial sequence | DQ026657 | 1566 | nuccore | 173860 |
20218 | Streptomyces rectiverticillatus strain NBRC 13079 16S ribosomal RNA gene, partial sequence | JN566038 | 1358 | nuccore | 173860 |
67770 | Streptomyces hiroshimensis strain CGMCC 4.1783 16S ribosomal RNA gene, partial sequence | FJ887952 | 1365 | nuccore | 66424 |
External links
@ref: 9544
culture collection no.: DSM 40436, ATCC 19845, ATCC 25491, CBS 951.69, IFO 13079, INMI 380, IPV 1852, ISP 5436, JCM 4511, KCC S-0511, NBRC 13079, NRRL B-12369, RIA 1271, VKM Ac-1503, BCRC 13306, CECT 3268, CGMCC 4.1783, NBIMCC 1593
straininfo link
- @ref: 84392
- straininfo: 92873
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9544 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40436) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40436 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
84392 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID92873.1 | StrainInfo: A central database for resolving microbial strain identifiers |