Strain identifier

BacDive ID: 15294

Type strain: No

Species: Streptomyces hiroshimensis

Strain Designation: 462

Strain history: KCC S-0103 <-- R. Shinobu 84.

NCBI tax ID(s): 66429 (species)

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General

@ref: 9118

BacDive-ID: 15294

DSM-Number: 40039

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces hiroshimensis 462 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 66429
  • Matching level: species

strain history

@refhistory
9118<- E.B. Shirling, ISP <- R. Shinobu, OEU, 462
67770KCC S-0103 <-- R. Shinobu 84.

doi: 10.13145/bacdive15294.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces hiroshimensis
  • full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991

  • synonyms

    @refsynonym
    20215Actinomyces biverticillatus
    20215Actinomyces rectiverticillatus
    20215Streptomyces fervens
    20215Streptomyces hiroshimensis
    20215Streptoverticillium salmonicida
    20215Streptoverticillium fervens
    20215Streptoverticillium hiroshimense
    20215Streptoverticillium roseoverticillatum
    20215Streptoverticillium rectiverticillatum
    20215Streptomyces roseoverticillatus
    20215Streptomyces spitsbergensis
    20215Streptoverticillium aureoversales
    20215Streptoverticillium fervens subsp. melrosporus
    20215Streptoverticillium aureoversile
    20215Streptoverticillium salmonis
    20215Streptoverticillium biverticillatum
    20215Streptomyces aureoversales
    20215Streptomyces biverticillatus
    20215Streptomyces fervens subsp. melrosporus
    20215Streptomyces salmonis
    20215Streptomyces aureoversilis
    20215Streptomyces rectiverticillatus

@ref: 9118

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces hiroshimensis

full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991

strain designation: 462

type strain: no

Culture and growth conditions

culture medium

  • @ref: 9118
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
9118positivegrowth28mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

compound production

@refcompound
9118anti-bacterial
9118anti-fungal

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
9118soil
67770SoilTannowa, Osaka Pref.JapanJPNAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 9118
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces roseoverticillatus gene for 16S rRNA, partial sequence, strain: NBRC 12817AB1841691466ena66429
20218Streptomyces roseoverticillatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4103D44008120ena66429
20218Streptomyces roseoverticillatus strain NRRL B-1993 16S ribosomal RNA gene, partial sequenceHQ6508071504ena66429
67770Streptomyces roseoverticillatus 16S rRNA gene, type strain LMG 20255AJ7813611486ena66429

External links

@ref: 9118

culture collection no.: DSM 40039, ATCC 19807, CBS 560.68, ETH 24434, ETH 24484, IFO 12817, IPV 2003, ISP 5039, JCM 4103, KCC S-0103, KCC S-0607, NBRC 12817, NRRL B-1993, RIA 1087, RIA 552, OEU 462, CECT 3269, IFO 3844, JCM 4607, NBRC 3844, PCM 2248, VKM Ac-880

straininfo link

  • @ref: 84388
  • straininfo: 46751

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9118Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40039)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40039
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
84388Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46751.1StrainInfo: A central database for resolving microbial strain identifiers