Strain identifier
BacDive ID: 15293
Type strain:
Species: Streptomyces hiroshimensis
Strain Designation: 201
Strain history: CIP <- 2003, JCM <- 1983, KCC <- R. Shinobu: strain 201
NCBI tax ID(s): 66424 (species)
General
@ref: 9116
BacDive-ID: 15293
DSM-Number: 40037
keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, spore-forming, mesophilic, Gram-positive, rod-shaped
description: Streptomyces hiroshimensis 201 is an obligate aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from soil.
NCBI tax id
- NCBI tax id: 66424
- Matching level: species
strain history
@ref | history |
---|---|
9116 | <- E.B. Shirling, ISP <- R. Shinobu, OEU, 201 |
67770 | KCC S-0098 <-- R. Shinobu 201. |
119910 | CIP <- 2003, JCM <- 1983, KCC <- R. Shinobu: strain 201 |
doi: 10.13145/bacdive15293.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces hiroshimensis
- full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptoverticillium salmonis 20215 Streptomyces roseoverticillatus 20215 Actinomyces biverticillatus 20215 Streptomyces aureoversales 20215 Streptoverticillium salmonicida 20215 Streptomyces biverticillatus 20215 Streptomyces fervens subsp. melrosporus 20215 Streptomyces salmonis 20215 Streptomyces aureoversilis 20215 Streptomyces rectiverticillatus 20215 Streptoverticillium fervens 20215 Streptomyces fervens 20215 Streptomyces hiroshimensis 20215 Streptoverticillium biverticillatum 20215 Streptoverticillium hiroshimense 20215 Streptoverticillium roseoverticillatum 20215 Streptoverticillium rectiverticillatum 20215 Actinomyces rectiverticillatus 20215 Streptomyces spitsbergensis 20215 Streptoverticillium aureoversales 20215 Streptoverticillium fervens subsp. melrosporus 20215 Streptoverticillium aureoversile
@ref: 9116
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces hiroshimensis
full scientific name: Streptomyces hiroshimensis (Shinobu 1955) Witt and Stackebrandt 1991
strain designation: 201
type strain: yes
Morphology
cell morphology
- @ref: 119910
- gram stain: positive
- cell shape: rod-shaped
- motility: no
colony morphology
@ref | colony color | incubation period | medium used | hemolysis ability |
---|---|---|---|---|
19391 | Red | 10-14 days | ISP 2 | |
19391 | Red | 10-14 days | ISP 3 | |
19391 | Red | 10-14 days | ISP 4 | |
19391 | Red | 10-14 days | ISP 5 | |
19391 | Red | 10-14 days | ISP 6 | |
19391 | Red | 10-14 days | ISP 7 | |
119910 | 1 |
multicellular morphology
@ref | forms multicellular complex | complex name | complex color | medium name |
---|---|---|---|---|
19391 | yes | Aerial Mycelium | White | ISP 2 |
19391 | yes | Aerial Mycelium | Rose | ISP 3 |
19391 | yes | Aerial Mycelium | Red | ISP 4 |
19391 | yes | Aerial Mycelium | White | ISP 5 |
19391 | yes | Aerial Mycelium | White | ISP 6 |
19391 | yes | Aerial Mycelium | White | ISP 7 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9116 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
19391 | ISP 2 | yes | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |
19391 | ISP 3 | yes | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |
19391 | ISP 4 | yes | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |
19391 | ISP 5 | yes | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |
19391 | ISP 6 | yes | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |
19391 | ISP 7 | yes | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |
37416 | MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum | yes | Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g) | |
9116 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
119910 | CIP Medium 57 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=57 |
culture temp
@ref | growth | type | temperature |
---|---|---|---|
19391 | positive | optimum | 28 |
9116 | positive | growth | 28 |
37416 | positive | growth | 30 |
67770 | positive | growth | 28 |
119910 | positive | growth | 10-37 |
119910 | no | growth | 41 |
119910 | no | growth | 45 |
Physiology and metabolism
tolerance
- @ref: 19391
- compound: Lysozyme
- percentage: 1
oxygen tolerance
@ref | oxygen tolerance | confidence |
---|---|---|
119910 | obligate aerobe | |
69480 | aerobe | 91.806 |
spore formation
@ref | spore description | spore formation | confidence |
---|---|---|---|
19391 | Formation of spore chains: Verticillus, spore surface: smooth | yes | |
69480 | yes | 91.854 | |
69481 | yes | 100 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
19391 | NaCl | positive | maximum | 2.5 % |
119910 | NaCl | positive | growth | 0-2 % |
119910 | NaCl | no | growth | 4 % |
119910 | NaCl | no | growth | 6 % |
119910 | NaCl | no | growth | 8 % |
119910 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
19391 | 62968 | cellulose | - | |
19391 | 16634 | raffinose | - | |
19391 | 26546 | rhamnose | - | |
19391 | 28757 | fructose | - | |
19391 | 29864 | mannitol | - | |
19391 | 17268 | myo-inositol | - | |
19391 | 18222 | xylose | - | |
19391 | 17992 | sucrose | - | |
19391 | 22599 | arabinose | - | |
19391 | 17234 | glucose | + | |
119910 | 16947 | citrate | - | carbon source |
119910 | 4853 | esculin | + | hydrolysis |
119910 | 17632 | nitrate | - | reduction |
119910 | 16301 | nitrite | - | reduction |
119910 | 17632 | nitrate | - | respiration |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
antibiotic resistance
- @ref: 119910
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
119910 | 35581 | indole | no |
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test | methylred-test |
---|---|---|---|---|---|
68368 | 15688 | acetoin | - | ||
68368 | 35581 | indole | - | ||
119910 | 15688 | acetoin | - | ||
119910 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
119910 | oxidase | - | |
119910 | beta-galactosidase | - | 3.2.1.23 |
119910 | alcohol dehydrogenase | - | 1.1.1.1 |
119910 | gelatinase | +/- | |
119910 | amylase | + | |
119910 | DNase | - | |
119910 | caseinase | - | 3.4.21.50 |
119910 | catalase | + | 1.11.1.6 |
119910 | tween esterase | + | |
119910 | lecithinase | + | |
119910 | lipase | - | |
119910 | lysine decarboxylase | - | 4.1.1.18 |
119910 | ornithine decarboxylase | - | 4.1.1.17 |
119910 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
119910 | tryptophan deaminase | - | |
119910 | urease | - | 3.5.1.5 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
119910 | - | + | + | + | - | + | - | - | - | - | + | + | - | - | - | - | - | + | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL |
---|---|---|---|---|---|---|---|---|---|---|---|
19391 | - | - | - | - | - | - | - | - | - | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
119910 | + | - | - | + | + | - | - | - | - | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | + | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | - | - | + | + | - | + | - | - | - | + | + | - | - | - | + | - | - | - | + | + | + | + | + | + | - | - | + | - | + |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
9116 | soil | ||||
67770 | Soil | Hiroshima | Japan | JPN | Asia |
119910 | Environment, Soil | Hiroshima | Japan | JPN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
9116 | 1 | Risk group (German classification) |
19391 | 1 | Risk group (German classification) |
119910 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces hiroshimensis strain CGMCC 4.1948 16S ribosomal RNA gene, partial sequence | HQ244459 | 1488 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4098 | D44005 | 120 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis gene for 16S rRNA, partial sequence, strain: NBRC 12785 | AB184144 | 1429 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis strain NBRC 12785 16S ribosomal RNA gene, partial sequence | JN566033 | 1488 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis gene for 16S rRNA, partial sequence, strain: NBRC 3720 | AB184789 | 1467 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis gene for 16S rRNA, partial sequence, strain: NBRC 3839 | AB184802 | 1454 | nuccore | 66424 |
20218 | Streptomyces hiroshimensis strain NRRL B-1823 16S ribosomal RNA gene, partial sequence | EF178677 | 1325 | nuccore | 66424 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Streptomyces hiroshimensis JCM 4586 | GCA_014650335 | scaffold | ncbi | 66424 |
66792 | Streptomyces hiroshimensis strain JCM 4586 | 66424.5 | wgs | patric | 66424 |
Genome-based predictions
predictions
@ref | trait | model | description | prediction | confidence | training_data |
---|---|---|---|---|---|---|
69481 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 100 | no |
69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 89.39 | no |
69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 96.867 | no |
69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 91.806 | no |
69480 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 91.854 | yes |
69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 97 | yes |
69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 89 | no |
External links
@ref: 9116
culture collection no.: DSM 40037, ATCC 19772, CBS 510.68, IFO 12785, ISP 5037, KCC S-0098, KCC S-0586, NBRC 12785, NRRL B-1823, RIA 1052, OEU 201, JCM 4098, BCRC 13375, CECT 3261, CGMCC 4.1948, CIP 108157, HUT 6033, IFO 3839, IMET 43546, JCM 4586, KCTC 9781, NBRC 3839, NCIMB 9838, NRRL B-5484, RIA 592, VKM Ac-902, CCRC 13375
straininfo link
- @ref: 84387
- straininfo: 38289
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 12132653 | A novel protein with alkaline phosphatase and protease inhibitor activities in Streptomyces hiroshimensis. | Nitta M, Goto M, Shibuya N, Okawa Y | Biol Pharm Bull | 10.1248/bpb.25.833 | 2002 | Alkaline Phosphatase/chemistry/*isolation & purification/pharmacology, Amino Acid Sequence, Bacterial Proteins/chemistry/*isolation & purification/pharmacology, Catalysis, Chromatography, Gel, Electrophoresis, Polyacrylamide Gel, Isoelectric Point, Molecular Sequence Data, Molecular Weight, Protease Inhibitors/chemistry/*isolation & purification/pharmacology, Streptomyces/*chemistry/growth & development, Substrate Specificity, Subtilisin/antagonists & inhibitors, Trypsin Inhibitors/chemistry/isolation & purification/pharmacology | Phylogeny |
Phylogeny | 25030519 | Streptomyces zagrosensis sp. nov., isolated from soil. | Mohammadipanah F, Hamedi J, Sproer C, Rohde M, Montero-Calasanz MDC, Klenk HP | Int J Syst Evol Microbiol | 10.1099/ijs.0.064527-0 | 2014 | Bacterial Typing Techniques, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Iran, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification | Genetics |
Phylogeny | 28005217 | Streptomyces gamaensis sp. nov., a novel actinomycete with antifungal activity isolated from soil in Gama, Chad. | Zhao S, Ye L, Liu C, Abagana AY, Zheng W, Sun P, Li J, Xiang W, Wang X | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0816-0 | 2016 | Antifungal Agents/*metabolism, Chad, Fungi/*drug effects, Microbial Sensitivity Tests, RNA, Ribosomal, 16S/genetics, *Soil Microbiology, Streptomyces/genetics/isolation & purification/*metabolism | Metabolism |
Phylogeny | 30625109 | Polyphasic classification of the gifted natural product producer Streptomyces roseifaciens sp. nov. | van der Aart LT, Nouioui I, Kloosterman A, Igual JM, Willemse J, Goodfellow M, van Wezel GP | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003215 | 2019 | Bacterial Typing Techniques, Base Composition, Biological Products, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Multilocus Sequence Typing, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry | Transcriptome |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9116 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40037) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40037 | |||
19391 | Wink, J. | http://www.dsmz.de/microorganisms/wink_pdf/DSM40037.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
37416 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/5748 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68368 | Automatically annotated from API 20E | |||||
68382 | Automatically annotated from API zym | |||||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
84387 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID38289.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
119910 | Curators of the CIP | Collection of Institut Pasteur (CIP 108157) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108157 |