Strain identifier
BacDive ID: 152884
Type strain: 
Species: Achromobacter denitrificans
NCBI tax ID(s): 32002 (species)
version 9 (current version)
General
@ref: 57907
BacDive-ID: 152884
keywords: Bacteria, microaerophile
description: Achromobacter denitrificans CCUG 47876 is a microaerophile bacterium that was isolated from Human cerebrospinal fluid,traumatic skull op..
NCBI tax id
- NCBI tax id: 32002
- Matching level: species
doi: 10.13145/bacdive152884.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Achromobacter
- species: Achromobacter denitrificans
- full scientific name: Achromobacter denitrificans (Rüger and Tan 1983 ex Leifson and Hugh 1954) Coenye et al. 2003
synonyms
@ref synonym 20215 Alcaligenes denitrificans 20215 Achromobacter xylosoxidans subsp. denitrificans 20215 Alcaligenes xylosoxidans subsp. denitrificans
@ref: 57907
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Achromobacter
species: Achromobacter denitrificans
type strain: no
Culture and growth conditions
culture temp
- @ref: 57907
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 57907
- oxygen tolerance: microaerophile
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | - | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | - | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 57907 C12:0 0.4 12 57907 C14:0 6.1 14 57907 C16:0 29.9 16 57907 C17:0 0.9 17 57907 C18:0 3.2 18 57907 C12:0 2OH 1.1 13.178 57907 C12:0 ALDE ? 1.7 10.915 57907 C14:0 2OH 1.9 15.205 57907 C14:0 3OH/C16:1 ISO I 5.8 15.485 57907 C16:1 ω7c 10.4 15.819 57907 C17:0 CYCLO 28.4 16.888 57907 C18:1 ω7c /12t/9t 8.9 17.824 57907 Unidentified 0.8 16.093 57907 Unidentified 0.6 18.448 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57907 | + | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | + | + | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 57907
- sample type: Human cerebrospinal fluid,traumatic skull op.
- sampling date: 2003
- geographic location: Karlstad
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Fluids | #Cerebrospinal fluid |
| #Infection | #Patient |
External links
@ref: 57907
culture collection no.: CCUG 47876
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 57907 | Curators of the CCUG | https://www.ccug.se/strain?id=47876 | Culture Collection University of Gothenburg (CCUG) (CCUG 47876) | |
| 68369 | Automatically annotated from API 20NE |