Strain identifier

BacDive ID: 152876

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 57896

BacDive-ID: 152876

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 47845 is a microaerophile, mesophilic bacterium that was isolated from Human wound,dog bite,69-yr-old man.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive152876.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 57896

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57896
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57896
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57896C14:01.914
    57896C15:00.615
    57896C16:016.416
    57896C18:05.318
    57896C13:1 at 12-133.612.931
    57896C14:0 3OH/C16:1 ISO I1.315.485
    57896C15:0 ANTEISO2.414.711
    57896C15:0 ISO3514.621
    57896C15:0 ISO 3OH516.135
    57896C16:0 iso2.115.626
    57896C16:1 ω7c0.815.819
    57896C17:0 iso0.416.629
    57896C18:1 ω9c3.517.769
    57896C18:2 ω6,9c/C18:0 ANTE13.617.724
    57896C20:4 ω6,9,12,15c0.519.395
    57896Unidentified0.615.952
    57896unknown 11.5410.811.541
    57896unknown 13.5665.813.566
    57896unknown 16.5800.616.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57896-+++-++-+-+----+-+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57896-++++---++---

Isolation, sampling and environmental information

isolation

  • @ref: 57896
  • sample type: Human wound,dog bite,69-yr-old man
  • sampling date: 2003-06-05
  • geographic location: Halmstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 57896

culture collection no.: CCUG 47845

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57896Curators of the CCUGhttps://www.ccug.se/strain?id=47845Culture Collection University of Gothenburg (CCUG) (CCUG 47845)
68377Automatically annotated from API NH
68382Automatically annotated from API zym