Strain identifier

BacDive ID: 152824

Type strain: No

Species: Aeromonas popoffii

NCBI tax ID(s): 70856 (species)

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General

@ref: 57835

BacDive-ID: 152824

keywords: Bacteria, aerobe, mesophilic

description: Aeromonas popoffii CCUG 47714 is an aerobe, mesophilic bacterium that was isolated from Human sputum,36-yr-old man,cystic fibrosis.

NCBI tax id

  • NCBI tax id: 70856
  • Matching level: species

doi: 10.13145/bacdive152824.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas popoffii
  • full scientific name: Aeromonas popoffii Huys et al. 1997

@ref: 57835

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas popoffii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57835
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57835
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose-fermentation
6836827613amygdalin-fermentation
6836828053melibiose-fermentation
6836817992sucrose-fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol-fermentation
6836817268myo-inositol-fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin+hydrolysis
6836827897tryptophan+energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis
6837418257ornithine-degradation
6837429016arginine-hydrolysis
6837425094lysine-degradation
6837416199urea-hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol+builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837418394palatinose+builds acid from
6837415792malonate-assimilation
6837427897tryptophan+energy source
6837417634D-glucose+builds acid from
6837417992sucrose-builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleyes
6836815688acetoinyes
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837435581indole+
6836815688acetoin+
6836835581indole+

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase+3.2.1.20
68374beta-galactosidase+3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase-3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68368cytochrome oxidase+1.9.3.1
68368gelatinase+
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase-3.2.1.23

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57835C12:03.912
    57835C13:00.213
    57835C14:0314
    57835C15:0115
    57835C16:021.116
    57835C17:00.717
    57835C18:00.418
    57835C13:0 iso0.812.612
    57835C13:0 ISO 2OH0.313.814
    57835C14:0 3OH/C16:1 ISO I4.315.485
    57835C15:0 ISO1.214.621
    57835C15:0 ISO 3OH1.116.135
    57835C16:0 anteiso0.215.717
    57835C16:0 iso0.815.626
    57835C16:1 ω7c37.815.819
    57835C16:1 ω7c alcohol0.715.386
    57835C17:0 iso316.629
    57835C17:1 ω6c0.316.862
    57835C17:1 ω8c0.916.792
    57835C17:1 ω9c ISO2.716.416
    57835C18:1 ω7c /12t/9t8.417.824
    57835C18:1 ω9c0.717.769
    57835C18:2 ω6,9c/C18:0 ANTE417.724
    57835C19:0 CYCLO ω9c0.818.87
    57835Unidentified0.410.912
    57835Unidentified0.315.175
    57835Unidentified0.117.316
    57835Unidentified0.318.081
    57835unknown 11.5410.211.541
    57835unknown 14.5030.614.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
57835--------+++++-------+

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
57835-------+--++-+--+-++---+-+----+-

Isolation, sampling and environmental information

isolation

  • @ref: 57835
  • sample type: Human sputum,36-yr-old man,cystic fibrosis
  • sampling date: 2003-05-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Sputum
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 57835

culture collection no.: CCUG 47714

straininfo link

  • @ref: 106729
  • straininfo: 111153

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57835Curators of the CCUGhttps://www.ccug.se/strain?id=47714Culture Collection University of Gothenburg (CCUG) (CCUG 47714)
68368Automatically annotated from API 20E
68374Automatically annotated from API ID32E
106729Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID111153.1