Strain identifier

BacDive ID: 152776

Type strain: No

Species: Achromobacter xylosoxidans

NCBI tax ID(s): 85698 (species)

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General

@ref: 57775

BacDive-ID: 152776

keywords: 16S sequence, Bacteria, aerobe, mesophilic

description: Achromobacter xylosoxidans CCUG 47596 is an aerobe, mesophilic bacterium that was isolated from Human cystic fibrosis,21-yr-old female.

NCBI tax id

  • NCBI tax id: 85698
  • Matching level: species

doi: 10.13145/bacdive152776.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Alcaligenaceae
  • genus: Achromobacter
  • species: Achromobacter xylosoxidans
  • full scientific name: Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

  • synonyms

    @refsynonym
    20215Alcaligenes xylosoxydans
    20215Alcaligenes xylosoxidans
    20215Alcaligenes denitrificans subsp. xylosoxydans
    20215Achromobacter xylosoxidans

@ref: 57775

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Alcaligenaceae

genus: Achromobacter

species: Achromobacter xylosoxidans

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57775
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 57775
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase-
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382alkaline phosphatase+3.1.3.1
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57775C12:00.612
    57775C14:03.214
    57775C15:00.515
    57775C16:03716
    57775C17:00.317
    57775C18:0118
    57775C12:0 2OH313.178
    57775C14:0 2OH3.615.205
    57775C14:0 3OH/C16:1 ISO I5.515.485
    57775C16:0 2OH217.233
    57775C16:0 3OH0.417.52
    57775C16:1 ω5c0.415.908
    57775C16:1 ω7c3.315.819
    57775C17:0 CYCLO3416.888
    57775C18:1 ω7c /12t/9t0.617.824
    57775C18:2 ω6,9c/C18:0 ANTE0.417.724
    57775C19:0 CYCLO ω8c118.9
    57775Unidentified0.7
    57775Unidentified0.8
    57775Unidentified0.9
    57775Unidentified0.6
    57775unknown 14.5030.414.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57775-++--+----+-----+---

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
57775+-------+-----+++++++

Isolation, sampling and environmental information

isolation

  • @ref: 57775
  • sample type: Human cystic fibrosis,21-yr-old female
  • sampling date: 2003
  • geographic location: Wien
  • country: Austria
  • origin.country: AUT
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Infection#Disease#Cystic fibrosis
#Infection#Patient

Sequence information

16S sequences

  • @ref: 124043
  • description: Achromobacter xylosoxidans partial 16S rRNA gene, strain CCUG 47596
  • accession: HG423417
  • length: 445
  • database: nuccore
  • NCBI tax ID: 85698

External links

@ref: 57775

culture collection no.: CCUG 47596

straininfo link

  • @ref: 106683
  • straininfo: 111107

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57775Curators of the CCUGhttps://www.ccug.se/strain?id=47596Culture Collection University of Gothenburg (CCUG) (CCUG 47596)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
106683Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID111107.1
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy