Strain identifier

BacDive ID: 152758

Type strain: No

Species: Bergeyella zoohelcum

NCBI tax ID(s): 1015 (species)

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General

@ref: 57752

BacDive-ID: 152758

keywords: Bacteria, microaerophile, mesophilic

description: Bergeyella zoohelcum CCUG 47558 is a microaerophile, mesophilic bacterium that was isolated from Human wound,dogbite.

NCBI tax id

  • NCBI tax id: 1015
  • Matching level: species

doi: 10.13145/bacdive152758.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Weeksellaceae
  • genus: Bergeyella
  • species: Bergeyella zoohelcum
  • full scientific name: Bergeyella zoohelcum (Holmes et al. 1987) Vandamme et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Weeksella zoohelcum

@ref: 57752

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Bergeyella

species: Bergeyella zoohelcum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57752
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 57752
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837727897tryptophan+energy source
6837716199urea+hydrolysis
6837718257ornithine-degradation
6837717306maltose-builds acid from
6837715824D-fructose-builds acid from
6837717634D-glucose+builds acid from
6837717992sucrose-builds acid from

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-glucosidase-3.2.1.20
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)-
68382alkaline phosphatase+3.1.3.1
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease+3.5.1.5
68377ornithine decarboxylase-4.1.1.17

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57752-+-+-++---++--------

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57752+----+++-+++

Isolation, sampling and environmental information

isolation

  • @ref: 57752
  • sample type: Human wound,dogbite
  • sampling date: 2003-03-01
  • geographic location: Skövde
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host#Mammals#Canidae (Dog)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 57752

culture collection no.: CCUG 47558

straininfo link

  • @ref: 106668
  • straininfo: 111087

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57752Curators of the CCUGhttps://www.ccug.se/strain?id=47558Culture Collection University of Gothenburg (CCUG) (CCUG 47558)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
106668Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID111087.1