Strain identifier

BacDive ID: 152661

Type strain: No

Species: Terrabacter tumescens

NCBI tax ID(s): 60443 (species)

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General

@ref: 57633

BacDive-ID: 152661

keywords: Bacteria, aerobe, mesophilic

description: Terrabacter tumescens CCUG 47307 is an aerobe, mesophilic bacterium that was isolated from Sediment containing mine tailings.

NCBI tax id

  • NCBI tax id: 60443
  • Matching level: species

doi: 10.13145/bacdive152661.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Intrasporangiaceae
  • genus: Terrabacter
  • species: Terrabacter tumescens
  • full scientific name: Terrabacter tumescens (Jensen 1934) Collins et al. 1989

  • synonyms

    @refsynonym
    20215Corynebacterium tumescens
    20215Arthrobacter tumescens
    20215Pimelobacter tumescens

@ref: 57633

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Intrasporangiaceae

genus: Terrabacter

species: Terrabacter tumescens

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57633
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57633
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • @reffatty acidpercentageECL
    57633C12:00.312
    57633C15:01.615
    57633C16:04.416
    57633C17:00.917
    57633C18:00.718
    57633C10:0 3OH0.311.423
    57633C13:0 3OH/C15:1 i I/H1.214.469
    57633C14:0 ISO11.413.618
    57633C15:0 ANTEISO414.711
    57633C15:0 ISO3214.621
    57633C15:1 ω6c0.714.856
    57633C16:0 iso9.715.626
    57633C16:1 ISO H9.915.461
    57633C16:1 ω7c6.315.819
    57633C17:0 10-methyl0.617.41
    57633C17:0 anteiso0.616.722
    57633C17:0 iso0.616.629
    57633C17:1 ω8c3.816.792
    57633C17:1 ω9c ANTEISO0.816.525
    57633C17:1 ω9c ISO2.516.416
    57633C18:1 ω9c3.617.769
    57633C18:2 ω6,9c/C18:0 ANTE3.417.724
    57633C19:1 ω11c/19:1 ω9c0.418.762
    57633Unidentified0.5
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG
  • @reffatty acidpercentageECL
    57633C14:00.414
    57633C15:00.215
    57633C16:01.316
    57633C18:00.518
    57633C13:0 3OH/C15:1 i I/H6.914.469
    57633C13:0 iso0.412.612
    57633C14:0 ISO4.513.618
    57633C15:0 ANTEISO7.414.711
    57633C15:0 ISO52.614.621
    57633C15:1 ω6c0.314.856
    57633C16:0 iso215.626
    57633C16:1 ISO H4.215.461
    57633C16:1 ω7c3.615.819
    57633C17:0 anteiso0.416.722
    57633C17:0 iso0.516.629
    57633C17:1 ω6c0.516.862
    57633C17:1 ω8c0.716.792
    57633C17:1 ω9c ANTEISO1.616.525
    57633C17:1 ω9c ISO5.316.416
    57633C18:1 ω9c2.717.769
    57633C18:2 ω6,9c/C18:0 ANTE2.317.724
    57633C19:1 ω11c/19:1 ω9c0.418.762
    57633Unidentified0.4
    57633Unidentified0.3
    57633Unidentified0.2
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
57633++---++-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57633--++-+++--++++-++---

Isolation, sampling and environmental information

isolation

  • @ref: 57633
  • sample type: Sediment containing mine tailings
  • sampling date: 2002-08-12
  • geographic location: Boliden
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Other#Mine
#Environmental#Terrestrial#Sediment

External links

@ref: 57633

culture collection no.: CCUG 47307

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57633Curators of the CCUGhttps://www.ccug.se/strain?id=47307Culture Collection University of Gothenburg (CCUG) (CCUG 47307)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym