Strain identifier

BacDive ID: 152645

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 57616

BacDive-ID: 152645

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 47275 is a microaerophile, mesophilic bacterium that was isolated from Human blood,dog bite,61-yr-old man.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive152645.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 57616

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57616
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57616
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57616C14:00.314
    57616C16:01.916
    57616C18:02.118
    57616C13:0 iso0.912.612
    57616C13:1 at 12-130.812.931
    57616C15:0 ANTEISO0.914.711
    57616C15:0 ISO68.814.621
    57616C15:0 ISO 3OH2.516.135
    57616C16:0 3OH0.817.52
    57616C17:0 iso 3OH5.218.161
    57616C18:1 ω9c3.317.769
    57616C18:2 ω6,9c/C18:0 ANTE4.417.724
    57616unknown 11.5411.111.541
    57616unknown 13.5666.713.566
    57616unknown 16.5800.416.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57616-+++-++-+-++-----+--

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57616+------++---

Isolation, sampling and environmental information

isolation

  • @ref: 57616
  • sample type: Human blood,dog bite,61-yr-old man
  • sampling date: 2002-12-01
  • geographic location: Sundsvall
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 57616

culture collection no.: CCUG 47275

straininfo link

  • @ref: 106578
  • straininfo: 214389

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57616Curators of the CCUGhttps://www.ccug.se/strain?id=47275Culture Collection University of Gothenburg (CCUG) (CCUG 47275)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
106578Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID214389.1