Strain identifier
BacDive ID: 15260
Type strain: 
Species: Streptomyces griseocarneus
Strain Designation: IMC S-0603
Strain history: KCC S-1010 <-- IFO 13861 <-- Y. Okami 1101-A5.
NCBI tax ID(s): 173770 (species)
General
@ref: 65931
BacDive-ID: 15260
DSM-Number: 41500
keywords: genome sequence, 16S sequence, Bacteria, spore-forming, mesophilic
description: Streptomyces griseocarneus IMC S-0603 is a spore-forming, mesophilic bacterium of the family Streptomycetaceae.
NCBI tax id
- NCBI tax id: 173770
- Matching level: species
strain history
| @ref | history |
|---|---|
| 65931 | <- JCM ("Streptomyces alboverticillatus") <- KCC <- IFO <- Y. Okami, strain 1101-A5 |
| 67770 | KCC S-1010 <-- IFO 13861 <-- Y. Okami 1101-A5. |
doi: 10.13145/bacdive15260.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces griseocarneus
- full scientific name: Streptomyces griseocarneus (Benedict et al. 1950) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptomyces griseocarneus 20215 Streptoverticillium griseocarneum 20215 Streptoverticillium septatum 20215 Streptoverticillium alboverticillatum 20215 Streptomyces septatus 20215 Streptomyces alboverticillatus
@ref: 65931
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces griseocarneus
full scientific name: Streptomyces griseocarneus (Benedict et al. 1950) Witt and Stackebrandt 1991
strain designation: IMC S-0603
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 93.575 | |
| 69480 | 100 | positive |
Culture and growth conditions
culture medium
- @ref: 65931
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 65931 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | yes | 100 |
| 69480 | yes | 100 |
metabolite production
- @ref: 67770
- metabolite: alboverticillin
- production: yes
Safety information
risk assessment
- @ref: 65931
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces alboverticillatus strain JCM 5010 16S ribosomal RNA gene, partial sequence | AY999766 | 1407 | ena | 173770 |
| 67770 | Streptomyces griseocarneus gene for 16S rRNA, partial sequence, strain: NBRC 13861 | AB249978 | 1456 | ena | 51201 |
Genome sequences
- @ref: 67770
- description: Streptomyces alboverticillatus NRRL B-24281
- accession: GCA_002150845
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 173770
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 100 | no |
| flagellated | no | 97.902 | no |
| gram-positive | yes | 90.937 | no |
| anaerobic | no | 99.359 | no |
| halophile | no | 91.911 | no |
| spore-forming | yes | 95.093 | no |
| thermophile | no | 97.405 | yes |
| glucose-util | yes | 91.785 | no |
| aerobic | yes | 91.476 | no |
| motile | no | 93.719 | no |
| glucose-ferment | no | 90.78 | no |
External links
@ref: 65931
culture collection no.: DSM 41678, ATCC 29818, DSM 41500, IFO 13861, IPV 2254, JCM 5010, KCC S-1010, NBRC 13861, CGMCC 4.1638, NRRL B-24281
straininfo link
- @ref: 84355
- straininfo: 39741
Reference
| @id | authors | title | doi/url | journal | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 65931 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41500 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41500) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |||
| 84355 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID39741.1 |