Strain identifier

BacDive ID: 152434

Type strain: No

Species: Histophilus somni

NCBI tax ID(s): 731 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 57341

BacDive-ID: 152434

keywords: mesophilic, microaerophile, Bacteria

description: Histophilus somni CCUG 46774 is a microaerophile, mesophilic bacterium that was isolated from Bovine brain,diseased animal.

NCBI tax id

  • NCBI tax id: 731
  • Matching level: species

doi: 10.13145/bacdive152434.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Histophilus
  • species: Histophilus somni
  • full scientific name: Histophilus somni Angen et al. 2003

@ref: 57341

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Histophilus

species: Histophilus somni

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57341
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57341
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837727897tryptophan+energy source
6837716199urea-hydrolysis
6837718257ornithine+degradation
6837717992sucrose+builds acid from
6837717306maltose+builds acid from
6837715824D-fructose+builds acid from
6837717634D-glucose+builds acid from

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase+4.1.1.17
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase+3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57341C12:03.812
    57341C14:09.114
    57341C16:033.116
    57341C18:01.718
    57341C13:0 ISO 2OH0.413.814
    57341C14:0 3OH/C16:1 ISO I6.115.485
    57341C16:1 ω5c0.315.908
    57341C16:1 ω7c35.715.819
    57341C18:1 ω7c /12t/9t4.217.824
    57341C18:1 ω9c1.317.769
    57341C18:2 ω6,9c/C18:0 ANTE2.617.724
    57341Unidentified110.912
    57341Unidentified0.215.177
    57341unknown 14.5030.514.503
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57341-----+--------+-----

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57341+++++------+

Isolation, sampling and environmental information

isolation

  • @ref: 57341
  • sample type: Bovine brain,diseased animal
  • country: Canada
  • origin.country: CAN
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Organ#Brain

External links

@ref: 57341

culture collection no.: CCUG 46774, MCCM 03029

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57341Curators of the CCUGhttps://www.ccug.se/strain?id=46774Culture Collection University of Gothenburg (CCUG) (CCUG 46774)
68377Automatically annotated from API NH
68382Automatically annotated from API zym