Strain identifier

BacDive ID: 152336

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

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General

@ref: 57219

BacDive-ID: 152336

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 46466 is a microaerophile, mesophilic bacterium that was isolated from Human blood,70-yr-old woman,abdominal pain.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive152336.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 57219

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 57219
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57219
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose-builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase+3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57219C14:01.914
    57219C16:03.116
    57219C18:01.918
    57219C13:0 iso1.212.612
    57219C15:0 ANTEISO2.214.711
    57219C15:0 ISO74.814.621
    57219C18:1 ω9c2.517.769
    57219C18:2 ω6,9c/C18:0 ANTE5.217.724
    57219Unidentified4.416.205
    57219Unidentified2.217.6
    57219unknown 16.5800.816.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57219-+++-++-+-++---+-+--

API NH

@refGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
57219-------+++--

Isolation, sampling and environmental information

isolation

  • @ref: 57219
  • sample type: Human blood,70-yr-old woman,abdominal pain
  • sampling date: 2002-05-07
  • geographic location: Karlstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 57219

culture collection no.: CCUG 46466

straininfo link

  • @ref: 106326
  • straininfo: 215330

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57219Curators of the CCUGhttps://www.ccug.se/strain?id=46466Culture Collection University of Gothenburg (CCUG) (CCUG 46466)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
106326Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID215330.1