Strain identifier

BacDive ID: 152185

Type strain: No

Species: Inquilinus limosus

NCBI tax ID(s): 171674 (species)

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General

@ref: 57020

BacDive-ID: 152185

keywords: Bacteria, aerobe, mesophilic

description: Inquilinus limosus CCUG 45997 is an aerobe, mesophilic bacterium that was isolated from Human cystic fibrosis.

NCBI tax id

  • NCBI tax id: 171674
  • Matching level: species

doi: 10.13145/bacdive152185.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Azospirillaceae
  • genus: Inquilinus
  • species: Inquilinus limosus
  • full scientific name: Inquilinus limosus Coenye et al. 2002

@ref: 57020

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Rhodospirillaceae

genus: Inquilinus

species: Inquilinus limosus

type strain: no

Morphology

colony morphology

  • @ref: 57020
  • incubation period: 2 days

Culture and growth conditions

culture temp

  • @ref: 57020
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 57020
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase+3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    57020C17:03.817
    57020C16:0 2OH3.317.233
    57020C17:0 2OH7.518.249
    57020C17:0 3OH2.818.535
    57020C17:1 ω6c5.116.862
    57020C18:0 2OH3.919.264
    57020C18:0 3OH4.319.551
    57020C18:1 2OH619.088
    57020C18:1 ω7c /12t/9t4817.824
    57020C18:2 ω6,9c/C18:0 ANTE5.217.724
    57020C19:0 CYCLO ω8c1018.9
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
57020-+++-++-+-++-++-++--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
57020-----+-+------------+

Isolation, sampling and environmental information

isolation

  • @ref: 57020
  • sample type: Human cystic fibrosis
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Infection#Disease#Cystic fibrosis
#Infection#Patient

External links

@ref: 57020

culture collection no.: CCUG 45997

straininfo link

  • @ref: 106193
  • straininfo: 110560

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
57020Curators of the CCUGhttps://www.ccug.se/strain?id=45997Culture Collection University of Gothenburg (CCUG) (CCUG 45997)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
106193Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID110560.1