Strain identifier
version 8.1 (current version)
General
@ref: 56800
BacDive-ID: 152001
keywords: Bacteria
description: Paenibacillus sp. CCUG 45500 is a bacterium that was isolated from Industrial product/environment.
NCBI tax id
- NCBI tax id: 58172
- Matching level: species
doi: 10.13145/bacdive152001.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus sp.
- full scientific name: Paenibacillus Ash et al. 1994
synonyms
- @ref: 20215
- synonym: Aerobacillus
@ref: 56800
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus sp.
type strain: no
Physiology and metabolism
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68368 | 30849 | L-arabinose | + | fermentation |
68368 | 27613 | amygdalin | + | fermentation |
68368 | 28053 | melibiose | + | fermentation |
68368 | 17992 | sucrose | + | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | + | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 16947 | citrate | - | assimilation |
68368 | 18257 | ornithine | - | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
68371 | 17754 | glycerol | + | builds acid from |
68371 | 17113 | erythritol | - | builds acid from |
68371 | 17108 | D-arabinose | - | builds acid from |
68371 | 30849 | L-arabinose | + | builds acid from |
68371 | 16988 | D-ribose | - | builds acid from |
68371 | 65327 | D-xylose | + | builds acid from |
68371 | 65328 | L-xylose | - | builds acid from |
68371 | 15963 | ribitol | - | builds acid from |
68371 | 74863 | methyl beta-D-xylopyranoside | + | builds acid from |
68371 | 12936 | D-galactose | + | builds acid from |
68371 | 17634 | D-glucose | + | builds acid from |
68371 | 15824 | D-fructose | + | builds acid from |
68371 | 16024 | D-mannose | + | builds acid from |
68371 | 17266 | L-sorbose | - | builds acid from |
68371 | 62345 | L-rhamnose | - | builds acid from |
68371 | 16813 | galactitol | - | builds acid from |
68371 | 17268 | myo-inositol | - | builds acid from |
68371 | 16899 | D-mannitol | - | builds acid from |
68371 | 17924 | D-sorbitol | - | builds acid from |
68371 | 43943 | methyl alpha-D-mannoside | + | builds acid from |
68371 | 320061 | methyl alpha-D-glucopyranoside | + | builds acid from |
68371 | 59640 | N-acetylglucosamine | + | builds acid from |
68371 | 27613 | amygdalin | + | builds acid from |
68371 | 18305 | arbutin | + | builds acid from |
68371 | 4853 | esculin | + | builds acid from |
68371 | 17814 | salicin | + | builds acid from |
68371 | 17057 | cellobiose | + | builds acid from |
68371 | 17306 | maltose | + | builds acid from |
68371 | 17716 | lactose | + | builds acid from |
68371 | 28053 | melibiose | + | builds acid from |
68371 | 17992 | sucrose | + | builds acid from |
68371 | 27082 | trehalose | + | builds acid from |
68371 | 15443 | inulin | + | builds acid from |
68371 | 6731 | melezitose | + | builds acid from |
68371 | 16634 | raffinose | + | builds acid from |
68371 | 28017 | starch | + | builds acid from |
68371 | 28087 | glycogen | + | builds acid from |
68371 | 17151 | xylitol | - | builds acid from |
68371 | 28066 | gentiobiose | + | builds acid from |
68371 | 32528 | turanose | + | builds acid from |
68371 | 62318 | D-lyxose | - | builds acid from |
68371 | 16443 | D-tagatose | - | builds acid from |
68371 | 28847 | D-fucose | - | builds acid from |
68371 | 18287 | L-fucose | - | builds acid from |
68371 | 18333 | D-arabitol | - | builds acid from |
68371 | 18403 | L-arabitol | - | builds acid from |
68371 | 24265 | gluconate | + | builds acid from |
68371 | Potassium 2-ketogluconate | + | builds acid from | |
68371 | Potassium 5-ketogluconate | - | builds acid from |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68368 | 15688 | acetoin | yes |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
---|---|---|---|---|
68368 | 15688 | acetoin | + | |
68368 | 35581 | indole | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68368 | cytochrome oxidase | - | 1.9.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 56800 C14:0 3.9 14 56800 C16:0 15.1 16 56800 C18:0 0.4 18 56800 C13:0 iso 0.3 12.612 56800 C14:0 ISO 2.6 13.618 56800 C15:0 3OH 0.6 16.504 56800 C15:0 ANTEISO 41.3 14.711 56800 C15:0 ISO 10.1 14.621 56800 C16:0 iso 3.8 15.626 56800 C16:1 ISO G 0.4 15.442 56800 C16:1 ω11c 1.3 15.757 56800 C17:0 anteiso 6.9 16.722 56800 C17:0 iso 0.7 16.629 56800 C17:1 ω5c ISO 0.2 16.461 56800 Unidentified 4.2 15.022 56800 Unidentified 1.2 15.514 56800 Unidentified 2 16.296 56800 unknown 14.503 0.4 14.503 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
56800 | + | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | + | + | + | + | - |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
56800 | - | + | - | - | + | - | + | - | - | + | + | + | + | + | - | - | - | - | - | - | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | - | + | + | - | - | - | - | - | - | + | + | - |
Isolation, sampling and environmental information
isolation
- @ref: 56800
- sample type: Industrial product/environment
- sampling date: 2001-07-11
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
- Cat1: #Engineered
- Cat2: #Industrial
- Cat3: #Engineered product
External links
@ref: 56800
culture collection no.: CCUG 45500
straininfo link
- @ref: 106028
- straininfo: 110379
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
56800 | Curators of the CCUG | https://www.ccug.se/strain?id=45500 | Culture Collection University of Gothenburg (CCUG) (CCUG 45500) | |
68368 | Automatically annotated from API 20E | |||
68371 | Automatically annotated from API 50CH acid | |||
106028 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID110379.1 |