Strain identifier
version 9.2 (current version)
General
@ref: 56666
BacDive-ID: 151899
keywords: Bacteria, microaerophile
description: Campylobacter coli CCUG 45147 is a microaerophile bacterium that was isolated from Hen feces.
NCBI tax id
- NCBI tax id: 195
- Matching level: species
doi: 10.13145/bacdive151899.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Campylobacteraceae
- genus: Campylobacter
- species: Campylobacter coli
- full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)
synonyms
@ref synonym 20215 Campylobacter hyoilei 20215 Vibrio coli
@ref: 56666
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Campylobacteraceae
genus: Campylobacter
species: Campylobacter coli
type strain: no
Culture and growth conditions
culture temp
- @ref: 56666
- growth: positive
- type: growth
- temperature: 37-42
Physiology and metabolism
oxygen tolerance
- @ref: 56666
- oxygen tolerance: microaerophile
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68373 | 16947 | citrate | - | assimilation |
68373 | 17272 | propionate | + | assimilation |
68373 | 25115 | malate | - | assimilation |
68373 | 30089 | acetate | - | assimilation |
68373 | 17634 | D-glucose | - | assimilation |
68373 | 78019 | triphenyltetrazolium chloride | + | reduction |
68373 | 606565 | hippurate | - | hydrolysis |
68373 | 17632 | nitrate | + | reduction |
68373 | 30031 | succinate | + | assimilation |
68373 | 16199 | urea | - | hydrolysis |
antibiotic resistance
@ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. | is resistant | resistance conc. |
---|---|---|---|---|---|---|---|
68373 | 48923 | erythromycin | yes | yes | 14 µg | ||
68373 | 474053 | cefazolin | yes | yes | 224 µg | ||
68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
metabolite production
- @ref: 68373
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: no
enzymes
@ref | value | activity | ec |
---|---|---|---|
68373 | catalase | + | 1.11.1.6 |
68373 | alkaline phosphatase | + | 3.1.3.1 |
68373 | L-aspartate arylamidase | - | 3.4.11.21 |
68373 | L-arginine arylamidase | + | |
68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
68373 | esterase | + | |
68373 | urease | - | 3.5.1.5 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 56666 C14:0 5.9 14 56666 C16:0 43.2 16 56666 C18:0 0.6 18 56666 C12:0 ALDE ? 0.8 10.915 56666 C14:0 3OH/C16:1 ISO I 3.9 15.485 56666 C16:1 ω7c 3.5 15.819 56666 C18:1 ω7c /12t/9t 32.6 17.824 56666 C19:0 CYCLO ω8c 9.5 18.9 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API CAM
@ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
56666 | - | + | + | - | - | + | - | + | - | + | - | - | + | - | + | - | + | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 56666
- sample type: Hen feces
- geographic location: Uppsala
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Birds | #Chicken |
#Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
External links
@ref: 56666
culture collection no.: CCUG 45147
straininfo link
- @ref: 105948
- straininfo: 110289
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
56666 | Curators of the CCUG | https://www.ccug.se/strain?id=45147 | Culture Collection University of Gothenburg (CCUG) (CCUG 45147) | |
68373 | Automatically annotated from API CAM | |||
105948 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID110289.1 |