Strain identifier

BacDive ID: 151682

Type strain: No

Species: Aggregatibacter aphrophilus

NCBI tax ID(s): 732 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 56409

BacDive-ID: 151682

keywords: Bacteria

description: Aggregatibacter aphrophilus CCUG 44626 A is a bacterium that was isolated from Human arthritis,animal bite.

NCBI tax id

  • NCBI tax id: 732
  • Matching level: species

doi: 10.13145/bacdive151682.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Aggregatibacter
  • species: Aggregatibacter aphrophilus
  • full scientific name: Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006
  • synonyms

    @refsynonym
    20215Haemophilus paraphrophilus
    20215Haemophilus aphrophilus

@ref: 56409

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Aggregatibacter

species: Aggregatibacter aphrophilus

type strain: no

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56409C12:00.312
    56409C14:021.114
    56409C16:033.516
    56409C18:01.818
    56409C13:0 ISO 2OH0.413.814
    56409C14:0 3OH/C16:1 ISO I6.915.485
    56409C15:0 ANTEISO0.414.711
    56409C15:0 ISO 3OH0.916.135
    56409C16:1 ω7c25.815.819
    56409C18:1 ω9c1.717.769
    56409C18:2 ω6,9c/C18:0 ANTE4.217.724
    56409Unidentified1.214.276
    56409Unidentified0.714.493
    56409Unidentified1.216.29
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56409-++--+----++++--+---

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
56409-++++--+++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 56409
  • sample type: Human arthritis,animal bite
  • sampling date: 2000-11-02
  • geographic location: Halmstad
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body-Site#Limb#Joint
#Infection#Inflammation
#Infection#Patient

External links

@ref: 56409

culture collection no.: CCUG 44626 A

straininfo link

  • @ref: 105768
  • straininfo: 215318

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56409Curators of the CCUGhttps://www.ccug.se/strain?id=44626Culture Collection University of Gothenburg (CCUG) (CCUG 44626 A)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
105768Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID215318.1