Strain identifier

BacDive ID: 151566

Type strain: No

Species: Micrococcus sp.

NCBI tax ID(s): 1271 (species)

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General

@ref: 56270

BacDive-ID: 151566

keywords: Bacteria, aerobe, mesophilic

description: Micrococcus sp. CCUG 44346 is an aerobe, mesophilic bacterium that was isolated from Human blood,73-yr-old man.

NCBI tax id

  • NCBI tax id: 1271
  • Matching level: species

doi: 10.13145/bacdive151566.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Micrococcus
  • species: Micrococcus sp.
  • full scientific name: Micrococcus Cohn 1872 (Approved Lists 1980)

@ref: 56270

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Micrococcus

species: Micrococcus sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 56270
  • growth: positive
  • type: growth
  • temperature: 30-37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 56270
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56270C14:02.314
    56270C15:0415
    56270C16:02.516
    56270C13:0 ANTEISO4.712.701
    56270C13:0 iso1.312.612
    56270C14:0 ISO3.113.618
    56270C15:0 ANTEISO58.314.711
    56270C15:0 ISO19.614.621
    56270C16:0 iso0.915.626
    56270C17:0 anteiso0.916.722
    56270C18:2 ω6,9c/C18:0 ANTE1.517.724
    56270Unidentified114.925
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56270-+-+--+-------------+
56270-+-+--+---+---------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56270-+-+++----++---+----

Isolation, sampling and environmental information

isolation

  • @ref: 56270
  • sample type: Human blood,73-yr-old man
  • sampling date: 2000-08-21
  • geographic location: Visby
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 56270

culture collection no.: CCUG 44346

straininfo link

  • @ref: 105667
  • straininfo: 109972

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56270Curators of the CCUGhttps://www.ccug.se/strain?id=44346Culture Collection University of Gothenburg (CCUG) (CCUG 44346)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
105667Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID109972.1