Strain identifier

BacDive ID: 151536

Type strain: No

Species: Pseudoglutamicibacter cumminsii

NCBI tax ID(s): 156979 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 56239

BacDive-ID: 151536

keywords: Bacteria, microaerophile, mesophilic

description: Pseudoglutamicibacter cumminsii CCUG 44254 A is a microaerophile, mesophilic bacterium that was isolated from Human cervix,45-yr-old woman.

NCBI tax id

  • NCBI tax id: 156979
  • Matching level: species

doi: 10.13145/bacdive151536.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Pseudoglutamicibacter
  • species: Pseudoglutamicibacter cumminsii
  • full scientific name: Pseudoglutamicibacter cumminsii (Funke et al. 1997) Busse 2016
  • synonyms

    • @ref: 20215
    • synonym: Arthrobacter cumminsii

@ref: 56239

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Pseudoglutamicibacter

species: Pseudoglutamicibacter cumminsii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 56239
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 56239
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation
6837516199urea-hydrolysis
6837529016arginine-hydrolysis
6837518257ornithine-degradation
683754853esculin-hydrolysis
6837517634D-glucose-fermentation
6837515824D-fructose-fermentation
6837516024D-mannose-fermentation
6837517306maltose-fermentation
6837517716lactose-fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate-reduction
6837517992sucrose-fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation
6837817634D-glucose-builds acid from
6837815824D-fructose-builds acid from
6837816024D-mannose-builds acid from
6837817306maltose-builds acid from
6837817716lactose-builds acid from
6837827082trehalose-builds acid from
6837816899D-mannitol-builds acid from
6837817151xylitol-builds acid from
6837828053melibiose-builds acid from
6837817632nitrate-reduction
6837816634raffinose-builds acid from
6837865327D-xylose-builds acid from
6837817992sucrose-builds acid from
68378320061methyl alpha-D-glucopyranoside-builds acid from
6837859640N-acetylglucosamine-builds acid from
6837829016arginine-hydrolysis
6837816199urea-hydrolysis

antibiotic resistance

@refmetaboliteis antibioticis sensitiveChEBIsensitivity conc.
68378lysostaphinyesyes
68375novobiocinyesyes283681.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinno
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin-
6837515688acetoin-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase-3.5.3.6
68378alkaline phosphatase-3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase+
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease-3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56239C16:03.216
    56239C18:01.318
    56239C14:0 ISO1.313.618
    56239C15:0 ANTEISO37.614.711
    56239C15:0 ISO4.314.621
    56239C16:0 iso17.115.626
    56239C17:0 anteiso26.816.722
    56239C17:0 iso1.416.629
    56239C18:1 ω9c2.217.769
    56239C18:2 ω6,9c/C18:0 ANTE4.717.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56239-++-----------------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56239--++-+--+-++--------

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
56239-----------------+--------

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
56239--------------------

Isolation, sampling and environmental information

isolation

  • @ref: 56239
  • sample type: Human cervix,45-yr-old woman
  • sampling date: 2000-12-22
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Urogenital tract
#Infection#Patient

External links

@ref: 56239

culture collection no.: CCUG 44254 A

straininfo link

  • @ref: 105641
  • straininfo: 302916

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56239Curators of the CCUGhttps://www.ccug.se/strain?id=44254Culture Collection University of Gothenburg (CCUG) (CCUG 44254 A)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
105641Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID302916.1