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Strain identifier

BacDive ID: 151536

Type strain: No

Species: Pseudoglutamicibacter cumminsii

NCBI tax ID(s): 156979 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 56239

BacDive-ID: 151536

keywords: Bacteria, microaerophile, mesophilic

description: Pseudoglutamicibacter cumminsii CCUG 44254 A is a microaerophile, mesophilic bacterium that was isolated from Human cervix,45-yr-old woman.

NCBI tax id

  • NCBI tax id: 156979
  • Matching level: species

doi: 10.13145/bacdive151536.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Pseudoglutamicibacter
  • species: Pseudoglutamicibacter cumminsii
  • full scientific name: Pseudoglutamicibacter cumminsii (Funke et al. 1997) Busse 2016
  • synonyms

    • @ref: 20215
    • synonym: Arthrobacter cumminsii

@ref: 56239

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Pseudoglutamicibacter

species: Pseudoglutamicibacter cumminsii

type strain: no

Culture and growth conditions

culture temp

  • @ref: 56239
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 56239
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837816199urea-hydrolysis
6837829016arginine-hydrolysis
6837859640N-acetylglucosamine-builds acid from
68378320061methyl alpha-D-glucopyranoside-builds acid from
6837817992sucrose-builds acid from
6837865327D-xylose-builds acid from
6837816634raffinose-builds acid from
6837817632nitrate-reduction
6837828053melibiose-builds acid from
6837817151xylitol-builds acid from
6837816899D-mannitol-builds acid from
6837827082trehalose-builds acid from
6837817716lactose-builds acid from
6837817306maltose-builds acid from
6837816024D-mannose-builds acid from
6837815824D-fructose-builds acid from
6837817634D-glucose-builds acid from
6837522599arabinose-fermentation
6837532528turanose-fermentation
6837559640N-acetylglucosamine-fermentation
6837517992sucrose-fermentation
6837517632nitrate-reduction
6837517057cellobiose-fermentation
6837516988D-ribose-fermentation
6837516634raffinose-fermentation
6837516899D-mannitol-fermentation
6837527082trehalose-fermentation
6837517716lactose-fermentation
6837517306maltose-fermentation
6837516024D-mannose-fermentation
6837515824D-fructose-fermentation
6837517634D-glucose-fermentation
683754853esculin-hydrolysis
6837518257ornithine-degradation
6837529016arginine-hydrolysis
6837516199urea-hydrolysis
6837928087glycogen-fermentation
6837917992sucrose-fermentation
6837917716lactose-fermentation
6837917306maltose-fermentation
6837916899D-mannitol-fermentation
6837965327D-xylose-fermentation
6837916988D-ribose-fermentation
6837917634D-glucose-fermentation
683795291gelatin-hydrolysis
6837916199urea-hydrolysis
683794853esculin-hydrolysis
6837917632nitrate-reduction

antibiotic resistance

@refmetaboliteis antibioticis sensitiveChEBIsensitivity conc.
68378lysostaphinyesyes
68375novobiocinyesyes283681.8 µg

metabolite production

@refChebi-IDmetaboliteproduction
6837815688acetoinno
6837515688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-test
6837815688acetoin-
6837515688acetoin-

enzymes

@refvalueactivityec
68378urease-3.5.1.5
68378arginine dihydrolase-3.5.3.6
68378alkaline phosphatase-3.1.3.1
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase-3.1.3.1
68375L-arginine arylamidase+
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase-4.1.1.17
68375arginine dihydrolase-3.5.3.6
68375urease-3.5.1.5
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56239C16:03.216
    56239C18:01.318
    56239C14:0 ISO1.313.618
    56239C15:0 ANTEISO37.614.711
    56239C15:0 ISO4.314.621
    56239C16:0 iso17.115.626
    56239C17:0 anteiso26.816.722
    56239C17:0 iso1.416.629
    56239C18:1 ω9c2.217.769
    56239C18:2 ω6,9c/C18:0 ANTE4.717.724
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56239-++-----------------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56239--++-+--+-++--------

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
56239-----------------+--------

API STA

@refGLUFRUMNEMALLACTREMANXLTMELNITPALVPRAFXYLSACMDGNAGADHURELSTR
56239--------------------

Isolation, sampling and environmental information

isolation

  • @ref: 56239
  • sample type: Human cervix,45-yr-old woman
  • sampling date: 2000-12-22
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Urogenital tract
#Infection#Patient

External links

@ref: 56239

culture collection no.: CCUG 44254 A

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
56239Curators of the CCUGhttps://www.ccug.se/strain?id=44254Culture Collection University of Gothenburg (CCUG) (CCUG 44254 A)
68375Automatically annotated from API ID32STA
68378Automatically annotated from API STA
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym